Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
---|---|
Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is fliL [H]
Identifier: 170024623
GI number: 170024623
Start: 2632456
End: 2632926
Strand: Direct
Name: fliL [H]
Synonym: YPK_2398
Alternate gene names: 170024623
Gene position: 2632456-2632926 (Clockwise)
Preceding gene: 170024622
Following gene: 170024624
Centisome position: 56.14
GC content: 47.98
Gene sequence:
>471_bases ATGTCTGATAATACCTTCCCGGCCAAGCGTAAGAGTTCGATCTGGCTGATCCTGCTGGTGCTGGTTGCGATAGCTGCCAG TGCGGGTGGCGGCTATAGCTGGTGGTTACTTCATAAGAGTAAACCGACCAATACCCAGATTGTTGCTGCCATCCCGGTAT TTATGCCGTTGGAGACCTTCACCGTTAATTTGATCACGCCCGATAATAATCTGGATCGCGTACTTTATATCGGTTTAACC CTAAGATTGCCCGACGATACCACCCGCACCAAACTCAATGACTATCTGCCGGAAGTTCGCAGCCGCTTGCTGCTACTGCT TTCTCGTCAGTCAGCCGATAGCTTATCGAATGAAGAAGGCAAACAGCGTTTAGTCAATGACATTAAAAACATACTTAGCC CGCCAATGGTTAAAGGCCAACCTAATCAGGTGATCAGCGATGTGCTGTTTACCGCATTCATATTGCGATAA
Upstream 100 bases:
>100_bases TTTGTGGGTGGACCGCGGTTGGTGGCCATCAGCACAGGCATTGCCCCAGGTTATTATCGTGATTCACCGATTAATATCGA AACAGGAATTTGTCTTCCCC
Downstream 100 bases:
>100_bases TCATTATGGGCGATAGCATTCTTTCACAAGCAGAGATTGACGCACTGTTAAATGGCGATAGCGGGAGTGAAGAACCCGAG ATAATCACCGCCAATGAGAC
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSDNTFPAKRKSSIWLILLVLVAIAASAGGGYSWWLLHKSKPTNTQIVAAIPVFMPLETFTVNLITPDNNLDRVLYIGLT LRLPDDTTRTKLNDYLPEVRSRLLLLLSRQSADSLSNEEGKQRLVNDIKNILSPPMVKGQPNQVISDVLFTAFILR
Sequences:
>Translated_156_residues MSDNTFPAKRKSSIWLILLVLVAIAASAGGGYSWWLLHKSKPTNTQIVAAIPVFMPLETFTVNLITPDNNLDRVLYIGLT LRLPDDTTRTKLNDYLPEVRSRLLLLLSRQSADSLSNEEGKQRLVNDIKNILSPPMVKGQPNQVISDVLFTAFILR >Mature_155_residues SDNTFPAKRKSSIWLILLVLVAIAASAGGGYSWWLLHKSKPTNTQIVAAIPVFMPLETFTVNLITPDNNLDRVLYIGLTL RLPDDTTRTKLNDYLPEVRSRLLLLLSRQSADSLSNEEGKQRLVNDIKNILSPPMVKGQPNQVISDVLFTAFILR
Specific function: Controls the rotational direction of flagella during chemotaxis [H]
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliL family [H]
Homologues:
Organism=Escherichia coli, GI1788254, Length=158, Percent_Identity=53.1645569620253, Blast_Score=166, Evalue=7e-43,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005503 [H]
Pfam domain/function: PF03748 FliL [H]
EC number: NA
Molecular weight: Translated: 17460; Mature: 17328
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTFPAKRKSSIWLILLVLVAIAASAGGGYSWWLLHKSKPTNTQIVAAIPVFMPLETF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEHHHCCCCCE TVNLITPDNNLDRVLYIGLTLRLPDDTTRTKLNDYLPEVRSRLLLLLSRQSADSLSNEEG EEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KQRLVNDIKNILSPPMVKGQPNQVISDVLFTAFILR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDNTFPAKRKSSIWLILLVLVAIAASAGGGYSWWLLHKSKPTNTQIVAAIPVFMPLETF CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEHHHCCCCCE TVNLITPDNNLDRVLYIGLTLRLPDDTTRTKLNDYLPEVRSRLLLLLSRQSADSLSNEEG EEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KQRLVNDIKNILSPPMVKGQPNQVISDVLFTAFILR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]