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The map label for this gene is fliD [H]

Identifier: 170024607

GI number: 170024607

Start: 2616100

End: 2617500

Strand: Direct

Name: fliD [H]

Synonym: YPK_2382

Alternate gene names: 170024607

Gene position: 2616100-2617500 (Clockwise)

Preceding gene: 170024597

Following gene: 170024608

Centisome position: 55.79

GC content: 46.4

Gene sequence:

>1401_bases
ATGGCAAGTATCAGTGCACTAGGTACCGGTTCAGGACTGGATTTAAATACATTGCTGTCACAATTATCGGCCGCAGAGCA
GACACGCCTTACCCCGCTAACCACGCAGCAAACCAGTTATAAAAGCAAACTTACCGCTTATGGTGTTTTGCAAAGTGCGT
TGGCAAAGCTTGAAACCGCGTCTACCGCCCTGAAAAAAGCTGACACGTTGAATTCTACGGCAGTCAGCGGCAGCAATTCC
GCATTCAGCGCGACAACGGATAGTGCGGCCAGTGCAGGTACGTACAGTATTGAAGTCACCAATCTGGCCAAAGCACAATC
GCTGTTATCGACAGATGTGCCTAGCGCTACAGATAAATTGGGTAGCAGTGATGCAACACGCACAATCACGATTGCTCAAC
CCGGCCAAAAAGAGCCGATGAAAATCAGCCTGACCAGCGAGCAAACTTCGCTGACGGGTATCCGTGATGCTATTAATAAG
CAGGAAGGCAGTGTCAACGCCAGTATTATGAAAGCAGATGATAATACTTATTATCTGGCATTAACGTCGAAGGATACCGG
TACGCAATCAGAAATGACCATCAGTGTAGCGGGTGATGAAACCTTAAATAATTTCCTGAACTATACCCCCAGCAGCACCG
GCGGTAGTGGTGCGCTGACGCAAAAAGTCAAAGCGGAAGACGCCACCTTGAGTGTTAATGGTGTCAGTATTACCCGCCAA
AGTAATACCATTACCGATGCACCTCAGGGCGTCACCATCAATCTGAAAGCCGTCACCAAAGAGGGCGCGCCAGAGCAACT
GACTATTGTCCGTGACAACACAGCCACAAAGGCGGCGATCCAAAGTTTTGTCGATGCCTATAACTCATTACAAACCACCT
TCGGCTCACTGACCAAATATACCGTGGTAGAGACAGGCCAAGATCAATCCACGAGTAATGGTGCATTAGTTGGGGATGGC
ACATTGCGCTCTATCCAGACGCAATTAAAGAGCCAATTGGCCTCTAGTCAATCTGGGGATTTGAAAACCTTAGCCAGCAT
CGGGATCACGCAAGATCTCGACGGTAAGTTGGTTATCGACGCCGATAAATTAAATACTGCACTCACCGATAAACCCAATA
GCGTCACTGCATTTTTTGTGGGTGATGGGGAAACTACTGGTTTTGCTACTCAGACTGAAAAGTTGCTCAATACCGCATTG
GATACGACATTAGGGACATTAAAAACAGCCACTGACGGTATTAATACTTCACTAAAAAACCTGGATAAACAAATTGCGGC
AACGACTGCCAGTATAGAAACAGCCATTGAGCGCTATAAAACACAATTTACTCAATTGGATAAGCTGATGACATCAATGA
ACAGTACAGCCAGTTTCTTAACACAACAATTTGAATCATAA

Upstream 100 bases:

>100_bases
CCCCTGCTATTCCAGCCATCATTATTCCTACTCTTTGTGTAAACTTTTCAGCTTTCTGACCGATAACAGAGTATCGACAC
TTGAATATTGAGGATTAGAC

Downstream 100 bases:

>100_bases
GGGATAAGACATGTATAAGCGATCTGGAAGTCAGGCTTACGCACAGGTAGGCCTGGAAAGTGGCGTAATGAGTGCCAGCC
CACACCAATTGATCGTGATG

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MASISALGTGSGLDLNTLLSQLSAAEQTRLTPLTTQQTSYKSKLTAYGVLQSALAKLETASTALKKADTLNSTAVSGSNS
AFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKLGSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINK
QEGSVNASIMKADDNTYYLALTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ
SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKYTVVETGQDQSTSNGALVGDG
TLRSIQTQLKSQLASSQSGDLKTLASIGITQDLDGKLVIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTAL
DTTLGTLKTATDGINTSLKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES

Sequences:

>Translated_466_residues
MASISALGTGSGLDLNTLLSQLSAAEQTRLTPLTTQQTSYKSKLTAYGVLQSALAKLETASTALKKADTLNSTAVSGSNS
AFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKLGSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINK
QEGSVNASIMKADDNTYYLALTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ
SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKYTVVETGQDQSTSNGALVGDG
TLRSIQTQLKSQLASSQSGDLKTLASIGITQDLDGKLVIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTAL
DTTLGTLKTATDGINTSLKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES
>Mature_465_residues
ASISALGTGSGLDLNTLLSQLSAAEQTRLTPLTTQQTSYKSKLTAYGVLQSALAKLETASTALKKADTLNSTAVSGSNSA
FSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKLGSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQ
EGSVNASIMKADDNTYYLALTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQS
NTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKYTVVETGQDQSTSNGALVGDGT
LRSIQTQLKSQLASSQSGDLKTLASIGITQDLDGKLVIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALD
TTLGTLKTATDGINTSLKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=469, Percent_Identity=49.2537313432836, Blast_Score=363, Evalue=1e-101,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48642; Mature: 48511

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASISALGTGSGLDLNTLLSQLSAAEQTRLTPLTTQQTSYKSKLTAYGVLQSALAKLETA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
STALKKADTLNSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKL
HHHHHHHHCCCCCEECCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHC
GSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVNASIMKADDNTYYLA
CCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEE
LTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ
EECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHEEECCCCEEEECCEEEEEC
SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKY
CCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEE
TVVETGQDQSTSNGALVGDGTLRSIQTQLKSQLASSQSGDLKTLASIGITQDLDGKLVID
EEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEE
ADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALDTTLGTLKTATDGINTSLKN
HHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASISALGTGSGLDLNTLLSQLSAAEQTRLTPLTTQQTSYKSKLTAYGVLQSALAKLETA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
STALKKADTLNSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKL
HHHHHHHHCCCCCEECCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHC
GSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVNASIMKADDNTYYLA
CCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEE
LTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ
EECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHEEECCCCEEEECCEEEEEC
SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKY
CCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEE
TVVETGQDQSTSNGALVGDGTLRSIQTQLKSQLASSQSGDLKTLASIGITQDLDGKLVID
EEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEE
ADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALDTTLGTLKTATDGINTSLKN
HHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]