| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024597
Identifier: 170024597
GI number: 170024597
Start: 2608587
End: 2608958
Strand: Direct
Name: 170024597
Synonym: YPK_2372
Alternate gene names: NA
Gene position: 2608587-2608958 (Clockwise)
Preceding gene: 170024596
Following gene: 170024607
Centisome position: 55.63
GC content: 44.89
Gene sequence:
>372_bases ATGAGCAAGTTAGTTATCAAAACGGCAACAGAAGATGATTTTTTTACACGGGGTCAACAACTCGCAACGCTCGCAGATGC AGGAAAATCACTGCCAGAAGAACATACCATTACCTTTGAAGACCCTCTGGAGATGGTCAGGGTATTAAGTGCTGCTCGTA TTGTTCTGCTACGGACAGTAAAAATGTATCCGGGCTCTATTACGTCACTGTCTACCCGGTTAAAGCGGGATCGCAGCACG GTAACCCGTGATGTCGCTATTCTAAAGAAAGCCGGGTTGGTCACTGTTGAACAAAAAATATTACCTGGGCATGGCCGCAT GAAAGAAGTAAGAACAATAGCGCATCGCCTCAAACTTGAAGCATTTTTGTAA
Upstream 100 bases:
>100_bases ACCGCCATTATCTCGGCGGGGTAGAAGCGATTGATTTTGTCAGCTTTGAACACATAGAGAGTTGCTTTCAGAAGGATTGG ACTGCGCTAAGGAGAAGTTA
Downstream 100 bases:
>100_bases AATTATCTAGCAAATTGGGGACCATACCGTGGCCCCCAACATATTAAAAATGCCCTTTGGTATATTAAAAGGCTTCAATA TATTAAAAGGCCAAAACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSKLVIKTATEDDFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTVKMYPGSITSLSTRLKRDRST VTRDVAILKKAGLVTVEQKILPGHGRMKEVRTIAHRLKLEAFL
Sequences:
>Translated_123_residues MSKLVIKTATEDDFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTVKMYPGSITSLSTRLKRDRST VTRDVAILKKAGLVTVEQKILPGHGRMKEVRTIAHRLKLEAFL >Mature_122_residues SKLVIKTATEDDFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTVKMYPGSITSLSTRLKRDRSTV TRDVAILKKAGLVTVEQKILPGHGRMKEVRTIAHRLKLEAFL
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13773; Mature: 13642
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVIKTATEDDFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTV CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHCHHHHHHHHHHHHHHHHHHH KMYPGSITSLSTRLKRDRSTVTRDVAILKKAGLVTVEQKILPGHGRMKEVRTIAHRLKLE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHHHHHH AFL HCC >Mature Secondary Structure SKLVIKTATEDDFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTV CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHCHHHHHHHHHHHHHHHHHHH KMYPGSITSLSTRLKRDRSTVTRDVAILKKAGLVTVEQKILPGHGRMKEVRTIAHRLKLE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHHHHHH AFL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA