Click here to switch to the map view.

The map label for this gene is 170024566

Identifier: 170024566

GI number: 170024566

Start: 2575293

End: 2575928

Strand: Direct

Name: 170024566

Synonym: YPK_2341

Alternate gene names: NA

Gene position: 2575293-2575928 (Clockwise)

Preceding gene: 170024564

Following gene: 170024567

Centisome position: 54.92

GC content: 54.4

Gene sequence:

>636_bases
ATGAATATCCTTATTGCTGGTCTTAAACGCCTGTTGGCTAACATTATCCGTATTGGCATCGTCTCAGACGTCGATCTTGC
TAACGGATTATGTCGGGTCAAAATGGGCAACCTGGAAACCGATTGGCTTAATTGGTTAACCCTGCGCGCCGGGCGGGTGC
GTTTTTGGTCTGCGCCATCGCTGGGTGAGCAAGTCATGGTGATCAGTATCGGTGGTGAGCTCACCACCGGTTTTGTGCTG
CCCGCTGTTTTCTCTGATGCCAATCCAGCCCCGTCACAATCCGCCGACGCTATCGTGATCACCTTCCCCGACGGCGCCCG
TTTTGAGTACGAGCCAGAAACCAGTCACCTGGCCGTAACCGGAATAGCAATAGCGGTGATTGAGGCTGGCGAATCTATCC
ATGCTACCGCCCCCAACATTACCTGTACCGCCTCGGTCAAAATCACACTGGACACACCCGAAGTGGAATGCACCAACAAC
CTGACGACGGCCACCTTAAACGTGAAAAGCGGCGGCCAGATGAGCGGCGACATCAGGCATTCCGGCGGTCAGTTTTCATC
TAATGGCGTGATCGTTGATAACCACAGCCACGGCGGTGTTGAGCGCGGTGGCGCTGATACGACAGGAACAAAATGA

Upstream 100 bases:

>100_bases
CCCGCTATTATTTTCTTATTCTCGCCTTAGATCTCTTGTGCCATCCCTCACACAAAACCCATCACATGCCGCGCGCGCCC
GTAGGCGGCACACTGGCCGC

Downstream 100 bases:

>100_bases
CAACCTATAAATATAGCGGCATGAACCGTAACAGCGGCTTGCAGATCGACGATATTGATCATATTCGCCAGTCAATCAGT
GACATTCTGGCCACACCACA

Product: phage baseplate assembly protein V

Products: NA

Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein V; Pyocin R2_PP; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly; Phage Baseplate Component; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage Baseplate Protein; Phage P2 Baseplate Assembly Protein GpV

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLETDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGELTTGFVL
PAVFSDANPAPSQSADAIVITFPDGARFEYEPETSHLAVTGIAIAVIEAGESIHATAPNITCTASVKITLDTPEVECTNN
LTTATLNVKSGGQMSGDIRHSGGQFSSNGVIVDNHSHGGVERGGADTTGTK

Sequences:

>Translated_211_residues
MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLETDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGELTTGFVL
PAVFSDANPAPSQSADAIVITFPDGARFEYEPETSHLAVTGIAIAVIEAGESIHATAPNITCTASVKITLDTPEVECTNN
LTTATLNVKSGGQMSGDIRHSGGQFSSNGVIVDNHSHGGVERGGADTTGTK
>Mature_211_residues
MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLETDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGELTTGFVL
PAVFSDANPAPSQSADAIVITFPDGARFEYEPETSHLAVTGIAIAVIEAGESIHATAPNITCTASVKITLDTPEVECTNN
LTTATLNVKSGGQMSGDIRHSGGQFSSNGVIVDNHSHGGVERGGADTTGTK

Specific function: Unknown

COG id: COG4540

COG function: function code R; Phage P2 baseplate assembly protein gpV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22113; Mature: 22113

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLETDWLNWLTLRAGRVRFWSAPS
CCEEHHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCHHHHEEEEEECCEEEEEECCC
LGEQVMVISIGGELTTGFVLPAVFSDANPAPSQSADAIVITFPDGARFEYEPETSHLAVT
CCCEEEEEEECCCCCCCEEEEEHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEE
GIAIAVIEAGESIHATAPNITCTASVKITLDTPEVECTNNLTTATLNVKSGGQMSGDIRH
EEEEEEEECCCEEEECCCCEEEEEEEEEEEECCCEEECCCEEEEEEEECCCCCCCCCEEC
SGGQFSSNGVIVDNHSHGGVERGGADTTGTK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLETDWLNWLTLRAGRVRFWSAPS
CCEEHHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCHHHHEEEEEECCEEEEEECCC
LGEQVMVISIGGELTTGFVLPAVFSDANPAPSQSADAIVITFPDGARFEYEPETSHLAVT
CCCEEEEEEECCCCCCCEEEEEHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEE
GIAIAVIEAGESIHATAPNITCTASVKITLDTPEVECTNNLTTATLNVKSGGQMSGDIRH
EEEEEEEECCCEEEECCCCEEEEEEEEEEEECCCEEECCCEEEEEEEECCCCCCCCCEEC
SGGQFSSNGVIVDNHSHGGVERGGADTTGTK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA