| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024440
Identifier: 170024440
GI number: 170024440
Start: 2449551
End: 2450135
Strand: Reverse
Name: 170024440
Synonym: YPK_2211
Alternate gene names: NA
Gene position: 2450135-2449551 (Counterclockwise)
Preceding gene: 170024441
Following gene: 170024439
Centisome position: 52.25
GC content: 46.84
Gene sequence:
>585_bases ATGAATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGCAGTTTAAGCCCGGTTCAATT AGCCTTTATCAAAAAATTAGCTCAACCGGGGCGCGAATTGGCTACCTTGAATTTCCCGTATCGTGCTGGTGAAAATGAGA AGAAAGGCTATTTAGCGCCAGGTTTAATTAAAGCTAGCTATCATAATTGCCGCGAATATCTTTCCTCACGCCACCCTGAG TTTCAAACTCACTATCGGCCCGCTTTATTGGCTTTACTGGCACGAGCGCCGCATACGGTATTGCTCTCTGGCAGCTGTGG TTTGGAGTTATTTAATAACTTAAATCTACCGAAGGCCATGATGAGCCATGTCAGTATCTTTGCTTATGGGCCGGTAGCTC GGCAGCGGCCTTTGTGCCACCACACGCTGGTTCAAGGGCAGCGTGATTTGATCTCCAGATTTTGGTGTCGGCAAGTGGAT AGCAAAGTCAGTGGTGGCCATTTGAATTATCTCTCTAACCCAGCATTACTGACGCTTTGTGAGCGTTTTATTGCGGCAGT TGAATCAACTCAGGGATTGCGATGA
Upstream 100 bases:
>100_bases TAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGTACGCGGCGCTATCGTGTTTTGAGT AATAAAAAGTTTAATTCACT
Downstream 100 bases:
>100_bases AGACGTTAGATGATTTGATCCCCCCGGCTACCCGCTGTATCGATCTGCTGGCCCCGCCTTTTTCTGGGCACTTACACCCG ATACTGGCGTTGGGCCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNKITLQIAYITGRSSPESGSLSPVQLAFIKKLAQPGRELATLNFPYRAGENEKKGYLAPGLIKASYHNCREYLSSRHPE FQTHYRPALLALLARAPHTVLLSGSCGLELFNNLNLPKAMMSHVSIFAYGPVARQRPLCHHTLVQGQRDLISRFWCRQVD SKVSGGHLNYLSNPALLTLCERFIAAVESTQGLR
Sequences:
>Translated_194_residues MNKITLQIAYITGRSSPESGSLSPVQLAFIKKLAQPGRELATLNFPYRAGENEKKGYLAPGLIKASYHNCREYLSSRHPE FQTHYRPALLALLARAPHTVLLSGSCGLELFNNLNLPKAMMSHVSIFAYGPVARQRPLCHHTLVQGQRDLISRFWCRQVD SKVSGGHLNYLSNPALLTLCERFIAAVESTQGLR >Mature_194_residues MNKITLQIAYITGRSSPESGSLSPVQLAFIKKLAQPGRELATLNFPYRAGENEKKGYLAPGLIKASYHNCREYLSSRHPE FQTHYRPALLALLARAPHTVLLSGSCGLELFNNLNLPKAMMSHVSIFAYGPVARQRPLCHHTLVQGQRDLISRFWCRQVD SKVSGGHLNYLSNPALLTLCERFIAAVESTQGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21602; Mature: 21602
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKITLQIAYITGRSSPESGSLSPVQLAFIKKLAQPGRELATLNFPYRAGENEKKGYLAP CCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GLIKASYHNCREYLSSRHPEFQTHYRPALLALLARAPHTVLLSGSCGLELFNNLNLPKAM CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHH MSHVSIFAYGPVARQRPLCHHTLVQGQRDLISRFWCRQVDSKVSGGHLNYLSNPALLTLC HHHHHHEEECCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ERFIAAVESTQGLR HHHHHHHHHCCCCC >Mature Secondary Structure MNKITLQIAYITGRSSPESGSLSPVQLAFIKKLAQPGRELATLNFPYRAGENEKKGYLAP CCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GLIKASYHNCREYLSSRHPEFQTHYRPALLALLARAPHTVLLSGSCGLELFNNLNLPKAM CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHH MSHVSIFAYGPVARQRPLCHHTLVQGQRDLISRFWCRQVDSKVSGGHLNYLSNPALLTLC HHHHHHEEECCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ERFIAAVESTQGLR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA