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The map label for this gene is yebC [C]

Identifier: 170024380

GI number: 170024380

Start: 2376936

End: 2377679

Strand: Reverse

Name: yebC [C]

Synonym: YPK_2146

Alternate gene names: 170024380

Gene position: 2377679-2376936 (Counterclockwise)

Preceding gene: 170024381

Following gene: 170024379

Centisome position: 50.7

GC content: 48.92

Gene sequence:

>744_bases
ATGGCAGGTCATAGTAAATGGGCCAACACAAAACACCGCAAAGCGGCACAGGATGCCAAACGCGGTAAGATTTTCACTAA
AATCATTCGTGAACTCGTCACTGCAGCCCGTCTGGGCGGTGGTGACCCCGGTGCTAACCCACGTCTCCGTGCGGCTATCG
ACAAAGCGTTGTCAAACAATATGACACGCGACACCCTAAACCGGGCGATTGCCCGTGGCGTGGGTGGTGATGAAGATAAC
AACATGGAAACCATCATTTACGAAGGTTATGGCCCAGGTGGCACAGCCGTAATGGTTGAATGCTTGAGTGACAATCGTAA
CCGTACCGTATCTGAAGTTCGCCATGCATTCACCAAAACAGGGGGGAATCTGGGCACTGATGGTTCTGTTTCTTATCTGT
TTACCAAAAAAGGCGTTATTTCTTATGCGCCGGGTTTGGAAGAAGATACGGTGATGGATGCAGCGTTAGAAGCGGGTGCA
GATGATATCGTGGTTTACGATGATGGTGCGATCGATGTGTTTACTGCATGGGAATCTCTGGGCGCGGTAAAAGATGTGTT
GGATGCTACCGGTTTGGTGGCTGAAGGTGCAGAAGTGTCATTAATCCCATCAACCAAAGCGGAATTGGATGCTGAAACTG
CCCCCAAACTGCTGCGTTTGATTGATATGCTGGAAGATTCTGATGATGTGCAAGAGGTTTACCATAATGGTGAAATCTCT
GATGAAGTAGCAGCAACCCTGTAA

Upstream 100 bases:

>100_bases
TAATCAACAAGCGATTGAAGAGTATGTTCTTTATTCCGTCTAGACCCAACGCTGTCACGTCAGGTGTGAAGGGTATCATT
AGGCTATTTTGGAGATTCTT

Downstream 100 bases:

>100_bases
GCGTTATCGCATCGCAATTTGCAGAATGCAGGCACCACACTTATTTATACTCTAAATAATTCGAGTTGCAGTGGCCTCCA
TGGATGGAGTGAGTAACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNNMTRDTLNRAIARGVGGDEDN
NMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKTGGNLGTDGSVSYLFTKKGVISYAPGLEEDTVMDAALEAGA
DDIVVYDDGAIDVFTAWESLGAVKDVLDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGEIS
DEVAATL

Sequences:

>Translated_247_residues
MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNNMTRDTLNRAIARGVGGDEDN
NMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKTGGNLGTDGSVSYLFTKKGVISYAPGLEEDTVMDAALEAGA
DDIVVYDDGAIDVFTAWESLGAVKDVLDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGEIS
DEVAATL
>Mature_246_residues
AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNNMTRDTLNRAIARGVGGDEDNN
METIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKTGGNLGTDGSVSYLFTKKGVISYAPGLEEDTVMDAALEAGAD
DIVVYDDGAIDVFTAWESLGAVKDVLDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGEISD
EVAATL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=30.1204819277108, Blast_Score=117, Evalue=7e-27,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=84.2105263157895, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=36.864406779661, Blast_Score=140, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=24.6913580246914, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=33.0798479087452, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24583305, Length=255, Percent_Identity=29.0196078431373, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2146_YERPY (B1JLL3)

Other databases:

- EMBL:   CP000950
- RefSeq:   YP_001720885.1
- ProteinModelPortal:   B1JLL3
- SMR:   B1JLL3
- GeneID:   6087506
- GenomeReviews:   CP000950_GR
- KEGG:   ypy:YPK_2146
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26272; Mature: 26140

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTLNRAIARGVGGDEDNNMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKT
CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHC
GGNLGTDGSVSYLFTKKGVISYAPGLEEDTVMDAALEAGADDIVVYDDGAIDVFTAWESL
CCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHH
GAVKDVLDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGEIS
HHHHHHHHHHCHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
DEVAATL
HHHHHCC
>Mature Secondary Structure 
AGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTLNRAIARGVGGDEDNNMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKT
CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHC
GGNLGTDGSVSYLFTKKGVISYAPGLEEDTVMDAALEAGADDIVVYDDGAIDVFTAWESL
CCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHH
GAVKDVLDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGEIS
HHHHHHHHHHCHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
DEVAATL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA