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The map label for this gene is ycgN [C]

Identifier: 170024351

GI number: 170024351

Start: 2348470

End: 2348916

Strand: Reverse

Name: ycgN [C]

Synonym: YPK_2117

Alternate gene names: 170024351

Gene position: 2348916-2348470 (Counterclockwise)

Preceding gene: 170024352

Following gene: 170024347

Centisome position: 50.09

GC content: 44.07

Gene sequence:

>447_bases
ATGTCACAACCTCCTTTTTGGCAACAAAAAACATTGGCTGAAATGTCAGATAGTGAATGGGAATCATTGTGTGACGGATG
CGGTCAATGCTGTTTGAATAAACTGATTGATGAAGATACTGACGAAATTTACTTCACCAATGTCGCCTGTGATCAGCTCA
ATATTAAAACCTGCCAATGCAGTAACTATGAGCGTCGCTTTGAATTAGAAGAAGATTGCATCAAGTTAACGCGGGAAAAT
TTGGTGACGTTTGCCTGGTTGCCACCAACGTGTGCCTATCGCCTGATTGGAGAGGGCCATGATTTACCCCGTTGGCATCC
GCTTTTAACGGGTTCTAAAGCTGCGATGCATGGTGAACGGATCTCTGTACGTCATATCGCAGTACGTGAGAGCGAAGTGG
TTGATTGGCAAGACCACATATTGAATAAGCCGAGTTGGGCTAAATAA

Upstream 100 bases:

>100_bases
AGAAACGTGCCGTCCGACTCTACTGTCGGGCGGCAAAACTTGCATCTGTAAGCTAAAGCGTCTATAACGGCCCGCTTATT
TATTTACACCGGATACCTAT

Downstream 100 bases:

>100_bases
CGCTTAAGGCAGCATGTCTAAATTGCTTTAGCCGATGACAGCCTAAGCTGCCATCTTTACCTTCATTGTTATGATGATAG
ATTGTTATAATGATAGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSQPPFWQQKTLAEMSDSEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKTCQCSNYERRFELEEDCIKLTREN
LVTFAWLPPTCAYRLIGEGHDLPRWHPLLTGSKAAMHGERISVRHIAVRESEVVDWQDHILNKPSWAK

Sequences:

>Translated_148_residues
MSQPPFWQQKTLAEMSDSEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKTCQCSNYERRFELEEDCIKLTREN
LVTFAWLPPTCAYRLIGEGHDLPRWHPLLTGSKAAMHGERISVRHIAVRESEVVDWQDHILNKPSWAK
>Mature_147_residues
SQPPFWQQKTLAEMSDSEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKTCQCSNYERRFELEEDCIKLTRENL
VTFAWLPPTCAYRLIGEGHDLPRWHPLLTGSKAAMHGERISVRHIAVRESEVVDWQDHILNKPSWAK

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=148, Percent_Identity=85.1351351351351, Blast_Score=268, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1039_YERPP (A4TJH7)

Other databases:

- EMBL:   CP000668
- RefSeq:   YP_001162412.1
- STRING:   A4TJH7
- GeneID:   5061872
- GenomeReviews:   CP000668_GR
- KEGG:   ypp:YPDSF_1039
- eggNOG:   COG2983
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- BioCyc:   YPES386656:YPDSF_1039-MONOMER
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 17176; Mature: 17044

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPPFWQQKTLAEMSDSEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKTCQC
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECC
SNYERRFELEEDCIKLTRENLVTFAWLPPTCAYRLIGEGHDLPRWHPLLTGSKAAMHGER
CCCHHHCCCHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC
ISVRHIAVRESEVVDWQDHILNKPSWAK
EEEEEEEECCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SQPPFWQQKTLAEMSDSEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKTCQC
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECC
SNYERRFELEEDCIKLTRENLVTFAWLPPTCAYRLIGEGHDLPRWHPLLTGSKAAMHGER
CCCHHHCCCHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC
ISVRHIAVRESEVVDWQDHILNKPSWAK
EEEEEEEECCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA