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The map label for this gene is hnr [H]

Identifier: 170024313

GI number: 170024313

Start: 2308242

End: 2309258

Strand: Reverse

Name: hnr [H]

Synonym: YPK_2078

Alternate gene names: 170024313

Gene position: 2309258-2308242 (Counterclockwise)

Preceding gene: 170024316

Following gene: 170024312

Centisome position: 49.24

GC content: 43.66

Gene sequence:

>1017_bases
ATGGAAAAACCACTAGCAGGTAAAAATATTTTAGTTGTCGAGGATGAAGTCGTATTCCGTACCGTCTTGGCGGAATACCT
CGGCTCACTTGGCGCGACAATCCATCAGGCCGAAAATGGGCTGGCGGCTTTATATCAGCTAAAAGGTCACTCTCCTGACT
TGATCCTTTGCGATCTGGCTATGCCGAAGATGGGGGGGATTGAGTTTGTTGAGCAGTTACTACTGAAAGGGATAAAGATC
CCTGTATTAGTGATCTCTGCAACTGACAAGATGGCGGATATTGCTCAGGTATTACGCTTAGGCGTAAAAGATGTGCTATT
GAAACCTATCGTGGATTTGAATCGTTTACGTGAAGCTGTATTGGCCTGCTTGTATCCCACATTATTTACTTCCCATGCTA
TTGAGGAAACAGAGCTCATTCAGGATTGGGAGGCTTTACGCAAAAATCCAAGTGGTGCCCTACAATTGTTAAAACAGTTA
CAGCCTCCAGCGCAACAAACCCTTGCTCATTGTCGGATAAATTATCGCCAGCTTACCATGGTAGAAAAACCAGGGTTGGT
ACTCGATATTGCAGCGTTATCCGATAAGGATTTAGCTTTCTATTGTTTGGATGTCACCCGTGCGGGTGATAATGGGGTTT
TAGCCGCATTATTATTACGTGTACTATTTAATGGCATCTTACAAGAACATTTAACACACCAACAGCAACGTTTACCACAG
ATGTCATCTTTACTTAAGCAGGTCAATCTACTATTAAGACGTACGCACCTTGATGGACAGTTTCCTTTATTAGTTGGTTA
TTACCATGTTGAGTATCAGAATTTAATTTTGGTTTCAGCCGGTTTGCATGCAAATATCAGAGCGGGTAAAAACCAGATTC
AGCTTAACAATGGTGTCCCTTTAGGGACCTTAAAAACAGCACACTTAAACCAGGTCAGTCAGCGCTGTGAAGCATGGCAG
TGTCAGGTATGGGGCGGAGGGAGCCGTTTAAGGCTGATGCTTGCTGCTGAAGAATAG

Upstream 100 bases:

>100_bases
ACATAGGCATAAAAAAGCAGAATTGGATGACAATTTCTGACAAGCACAAACAACTATTTTGAGCCACTATTAAACTCAAG
GTGAGCAAGAGAAGCAGTGC

Downstream 100 bases:

>100_bases
TCATCTCAATAATAGTTTTTTGCTTCACTTCCTTTTTTTCCCCAATGAGTTAAACCTTCCCTTGTTTATAAATGGTTTTA
TAACAAACCAGTAAAATCAG

Product: response regulator of RpoS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MEKPLAGKNILVVEDEVVFRTVLAEYLGSLGATIHQAENGLAALYQLKGHSPDLILCDLAMPKMGGIEFVEQLLLKGIKI
PVLVISATDKMADIAQVLRLGVKDVLLKPIVDLNRLREAVLACLYPTLFTSHAIEETELIQDWEALRKNPSGALQLLKQL
QPPAQQTLAHCRINYRQLTMVEKPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRVLFNGILQEHLTHQQQRLPQ
MSSLLKQVNLLLRRTHLDGQFPLLVGYYHVEYQNLILVSAGLHANIRAGKNQIQLNNGVPLGTLKTAHLNQVSQRCEAWQ
CQVWGGGSRLRLMLAAEE

Sequences:

>Translated_338_residues
MEKPLAGKNILVVEDEVVFRTVLAEYLGSLGATIHQAENGLAALYQLKGHSPDLILCDLAMPKMGGIEFVEQLLLKGIKI
PVLVISATDKMADIAQVLRLGVKDVLLKPIVDLNRLREAVLACLYPTLFTSHAIEETELIQDWEALRKNPSGALQLLKQL
QPPAQQTLAHCRINYRQLTMVEKPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRVLFNGILQEHLTHQQQRLPQ
MSSLLKQVNLLLRRTHLDGQFPLLVGYYHVEYQNLILVSAGLHANIRAGKNQIQLNNGVPLGTLKTAHLNQVSQRCEAWQ
CQVWGGGSRLRLMLAAEE
>Mature_338_residues
MEKPLAGKNILVVEDEVVFRTVLAEYLGSLGATIHQAENGLAALYQLKGHSPDLILCDLAMPKMGGIEFVEQLLLKGIKI
PVLVISATDKMADIAQVLRLGVKDVLLKPIVDLNRLREAVLACLYPTLFTSHAIEETELIQDWEALRKNPSGALQLLKQL
QPPAQQTLAHCRINYRQLTMVEKPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRVLFNGILQEHLTHQQQRLPQ
MSSLLKQVNLLLRRTHLDGQFPLLVGYYHVEYQNLILVSAGLHANIRAGKNQIQLNNGVPLGTLKTAHLNQVSQRCEAWQ
CQVWGGGSRLRLMLAAEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787487, Length=337, Percent_Identity=64.6884272997033, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI1790437, Length=203, Percent_Identity=29.064039408867, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=32.7102803738318, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786911, Length=102, Percent_Identity=36.2745098039216, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787375, Length=101, Percent_Identity=30.6930693069307, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 37471; Mature: 37471

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPLAGKNILVVEDEVVFRTVLAEYLGSLGATIHQAENGLAALYQLKGHSPDLILCDLA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCHHHHHHCCCCEEHHEECCCCCCEEEEEEC
MPKMGGIEFVEQLLLKGIKIPVLVISATDKMADIAQVLRLGVKDVLLKPIVDLNRLREAV
CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LACLYPTLFTSHAIEETELIQDWEALRKNPSGALQLLKQLQPPAQQTLAHCRINYRQLTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCHHEEEE
VEKPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRVLFNGILQEHLTHQQQRLPQ
EECCCCEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
MSSLLKQVNLLLRRTHLDGQFPLLVGYYHVEYQNLILVSAGLHANIRAGKNQIQLNNGVP
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCEEEECCCCEEEECCCCC
LGTLKTAHLNQVSQRCEAWQCQVWGGGSRLRLMLAAEE
CCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MEKPLAGKNILVVEDEVVFRTVLAEYLGSLGATIHQAENGLAALYQLKGHSPDLILCDLA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCHHHHHHCCCCEEHHEECCCCCCEEEEEEC
MPKMGGIEFVEQLLLKGIKIPVLVISATDKMADIAQVLRLGVKDVLLKPIVDLNRLREAV
CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LACLYPTLFTSHAIEETELIQDWEALRKNPSGALQLLKQLQPPAQQTLAHCRINYRQLTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCHHEEEE
VEKPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRVLFNGILQEHLTHQQQRLPQ
EECCCCEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
MSSLLKQVNLLLRRTHLDGQFPLLVGYYHVEYQNLILVSAGLHANIRAGKNQIQLNNGVP
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCEEEECCCCEEEECCCCC
LGTLKTAHLNQVSQRCEAWQCQVWGGGSRLRLMLAAEE
CCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]