| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024294
Identifier: 170024294
GI number: 170024294
Start: 2287950
End: 2288213
Strand: Reverse
Name: 170024294
Synonym: YPK_2059
Alternate gene names: NA
Gene position: 2288213-2287950 (Counterclockwise)
Preceding gene: 170024295
Following gene: 170024291
Centisome position: 48.8
GC content: 40.15
Gene sequence:
>264_bases ATGTCTCAGTATAAATTAGCTAAAACAGTATTCTTTGGGGACTTGAAAGTCAGCGCCGCTCTCTATAAGTATGAAATTTA TTGTGAAGAGTCAGAGTTGATTTACCACGCGGCCATTTATTCTGAACAAGTTATTGCTGCTGGTAAACACACCTATCCAG TTTGGGTCAGAAAAGATCATATGATATTAAAATCACCAGCACATATCTTGGAGAAGGCCGTTGAGGCTTGCGAAGAGCAT TGGCTGAAACACTACAAAGGGTAG
Upstream 100 bases:
>100_bases GATTTTGTATGTCGGGTATATTAATTTGCAGTGAATATCACAGTTATATAATTCTGATTAGCAGATGATGTGATACCGAT TACAGCAAAGGCTATGGTTT
Downstream 100 bases:
>100_bases CGTTATGCTGAGGTTTTCTATCGTGGTTAATTAACAAAAAAAACTTATAATAATACGCCTAGCTTTAGGCGTATTATTAT ATCTAGTGTCTACAACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSQYKLAKTVFFGDLKVSAALYKYEIYCEESELIYHAAIYSEQVIAAGKHTYPVWVRKDHMILKSPAHILEKAVEACEEH WLKHYKG
Sequences:
>Translated_87_residues MSQYKLAKTVFFGDLKVSAALYKYEIYCEESELIYHAAIYSEQVIAAGKHTYPVWVRKDHMILKSPAHILEKAVEACEEH WLKHYKG >Mature_86_residues SQYKLAKTVFFGDLKVSAALYKYEIYCEESELIYHAAIYSEQVIAAGKHTYPVWVRKDHMILKSPAHILEKAVEACEEHW LKHYKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10148; Mature: 10017
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYKLAKTVFFGDLKVSAALYKYEIYCEESELIYHAAIYSEQVIAAGKHTYPVWVRKDH CCCCHHHHEEEECCCEEEEEEEEEEEEECCCCEEEEHHHHHCHHHCCCCCCCEEEEECCC MILKSPAHILEKAVEACEEHWLKHYKG EEEECHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQYKLAKTVFFGDLKVSAALYKYEIYCEESELIYHAAIYSEQVIAAGKHTYPVWVRKDH CCCHHHHEEEECCCEEEEEEEEEEEEECCCCEEEEHHHHHCHHHCCCCCCCEEEEECCC MILKSPAHILEKAVEACEEHWLKHYKG EEEECHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA