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The map label for this gene is yciH [H]

Identifier: 170024258

GI number: 170024258

Start: 2252638

End: 2252964

Strand: Reverse

Name: yciH [H]

Synonym: YPK_2023

Alternate gene names: 170024258

Gene position: 2252964-2252638 (Counterclockwise)

Preceding gene: 170024259

Following gene: 170024256

Centisome position: 48.04

GC content: 47.71

Gene sequence:

>327_bases
ATGAGCAATGATAATAGTCGGTTAGTTTATTCGACTGACAGTGGCCGGATCAGCGAACCAGAGAGCAAAGTTGAGCGGCC
AAAGGGGGATGGCATTGTCCGTATACAGCGTCAAACTAGCGGCCGTAAAGGTAAAGGTGTTAGCCTTATAACAGGCATTG
ACGGCAGTGATGAGGATCTGGATAAGCTAGCCGCTGAGTTGAAAAAGAAATGCGGCTGCGGTGGTTCGGTCAAAGACGGT
GTTATTGAAATTCAGGGCGACAAGCGGGATTTATTGAAACAACTGTTAGACGCTAAAGGGATGAAAGTTAAATTGGCAGG
GGGGTGA

Upstream 100 bases:

>100_bases
CAGGTGTTGATTACATGGTAATCGGTCGCCCAATTACACAATCTCCTGATCCGGAAAAAACGCTGCGCGAAATATTGGCA
TCACTGACGAAGGTGGCATA

Downstream 100 bases:

>100_bases
TTTAATAAAATCCTTTTTTCCGCGCAGATATAAAATACGGCGTTGATATTGTCAAACGCCGTATTTTATTTAGAACTTCT
AATGCCGTGGCAATATAAAC

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSNDNSRLVYSTDSGRISEPESKVERPKGDGIVRIQRQTSGRKGKGVSLITGIDGSDEDLDKLAAELKKKCGCGGSVKDG
VIEIQGDKRDLLKQLLDAKGMKVKLAGG

Sequences:

>Translated_108_residues
MSNDNSRLVYSTDSGRISEPESKVERPKGDGIVRIQRQTSGRKGKGVSLITGIDGSDEDLDKLAAELKKKCGCGGSVKDG
VIEIQGDKRDLLKQLLDAKGMKVKLAGG
>Mature_107_residues
SNDNSRLVYSTDSGRISEPESKVERPKGDGIVRIQRQTSGRKGKGVSLITGIDGSDEDLDKLAAELKKKCGCGGSVKDGV
IEIQGDKRDLLKQLLDAKGMKVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=108, Percent_Identity=80.5555555555556, Blast_Score=171, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11502; Mature: 11371

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDNSRLVYSTDSGRISEPESKVERPKGDGIVRIQRQTSGRKGKGVSLITGIDGSDEDL
CCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH
DKLAAELKKKCGCGGSVKDGVIEIQGDKRDLLKQLLDAKGMKVKLAGG
HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
SNDNSRLVYSTDSGRISEPESKVERPKGDGIVRIQRQTSGRKGKGVSLITGIDGSDEDL
CCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH
DKLAAELKKKCGCGGSVKDGVIEIQGDKRDLLKQLLDAKGMKVKLAGG
HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]