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The map label for this gene is ydgI [H]

Identifier: 170024176

GI number: 170024176

Start: 2150702

End: 2152093

Strand: Reverse

Name: ydgI [H]

Synonym: YPK_1939

Alternate gene names: 170024176

Gene position: 2152093-2150702 (Counterclockwise)

Preceding gene: 170024177

Following gene: 170024174

Centisome position: 45.89

GC content: 48.85

Gene sequence:

>1392_bases
TTGGAAAAGAAACTCGGTCTGACTGCGCTAACGGCGCTGGTTCTTAGCTCAATGCTGGGAGCGGGTGTCTTTAGCCTGCC
GCAAAACATGGCTGAAGTCGCCAGCCCTGCTGCTCTGCTCATTGGCTGGAGTATTACTGGCATCGGGATCATTTTCCTGG
CCTTCGCCATGTTGCTACTGACTCGCCTACGCCCTGATCTCGATGGCGGGATATTTACCTATGCTAAAGAAGGTTTTGGC
GACCTCATCGGTTTTTTCTCTGCGTGGGGTTATTGGCTATGTGCGGTGATCGCTAACGTATCTTACTTGGTGATTGTTTT
TGCAGCACTGAGCTTTTTTACCGATAAATCCGGCAGCATCATTTTTGGTGAAGGTAACACCTGGCAGGCATTGTTGGGGG
CATCATTCCTGTTATGGCTGGTTCACGCTTTGGTACTACGAGGGGTACAGACTGCGGCCAGTATCAACTTGGCGGCAACA
CTGGCAAAACTGTTACCTATTGGCGGCTTTATTATTCTGGCCGGCATCGCATTTAGCCTCGATACTTTTAGTATCGATTT
CACTGGCTTAGCACTACACACGCCGGTTTGGCAGCAAGTAAAAGATACCATGCTGATTACCTTATGGGTCTTTATCGGTG
TCGAAGGTGCAGTGGTTGTCTCTGCCCGTGCACGCAACAAGAAAGATGTGGGCCGTGCCACGATGCTAGCCGTAATTTCA
GCCCTTAGCGTCTACCTGTTGATTACCTTATTGTCACTCGGCGTGGTGCCTCGGGCGGAATTAGCGGGTATGCGTAATCC
GTCAATGGCAGGCATTATGGTCGAAATGATTGGCCCATGGGGAGAAATCATTATCGCCACCGGGCTGATTATTTCTGTCT
GTGGTGCTTATCTTAGCTGGACAATTATGGCCGCTGAAGTACCGATGGTGGCAGCTAAACATGGCGCTTTCCCTAAAATA
TTCCGTCACCAAAATAAAAACAACGCGCCAGCTCAATCCTTATGGTTAACCAACAGCGCGGTACAAGTTGCGCTGGTTTT
GATTTGGCTGACAGGCAGCAATTACAATACCTTACTGACAATTGCCTCGGAAATGATTCTGGTGCCCTATTTTCTCGTCG
GCGCATTCTTATTTAAAGTGGCATTAAAGCGGCAAGATTGGCGTTTGATTGTTGCTGCCAGCGGGGCTTGTTTGTACGGT
TTATGGCTGATTTATGCTGCTGGTTTAGTGTATTTACTGTTGTCTGTACTTTTGTATGCCCCAGGATTATTGGTGTTTAT
TTATGCTCGTAAGGGGCATGAAGGGCTGAGATTGCTGAATACGGTTGAGCGGGCGGCGATTTTCCTCGTGTTACTCGCCA
CTATCCCAGCGACATGGTTGATGATGCACTAG

Upstream 100 bases:

>100_bases
TATTGATAAATTTGCCTCATATAATGCTATTTACAAGCCAGTAATCATTCATTAATACTTTAAAATCAAGTCATTAATAT
TTTAAAATCAGGATCCATAA

Downstream 100 bases:

>100_bases
GTTAGTGACCGGTTCTTCAAAAACTAATCATTTGGCATTTGGGATAAATTCACAGATAGACATTCATCTTTCTGACTCAA
TGCCATTTCAGCGGGGAATT

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAEVASPAALLIGWSITGIGIIFLAFAMLLLTRLRPDLDGGIFTYAKEGFG
DLIGFFSAWGYWLCAVIANVSYLVIVFAALSFFTDKSGSIIFGEGNTWQALLGASFLLWLVHALVLRGVQTAASINLAAT
LAKLLPIGGFIILAGIAFSLDTFSIDFTGLALHTPVWQQVKDTMLITLWVFIGVEGAVVVSARARNKKDVGRATMLAVIS
ALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMIGPWGEIIIATGLIISVCGAYLSWTIMAAEVPMVAAKHGAFPKI
FRHQNKNNAPAQSLWLTNSAVQVALVLIWLTGSNYNTLLTIASEMILVPYFLVGAFLFKVALKRQDWRLIVAASGACLYG
LWLIYAAGLVYLLLSVLLYAPGLLVFIYARKGHEGLRLLNTVERAAIFLVLLATIPATWLMMH

Sequences:

>Translated_463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAEVASPAALLIGWSITGIGIIFLAFAMLLLTRLRPDLDGGIFTYAKEGFG
DLIGFFSAWGYWLCAVIANVSYLVIVFAALSFFTDKSGSIIFGEGNTWQALLGASFLLWLVHALVLRGVQTAASINLAAT
LAKLLPIGGFIILAGIAFSLDTFSIDFTGLALHTPVWQQVKDTMLITLWVFIGVEGAVVVSARARNKKDVGRATMLAVIS
ALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMIGPWGEIIIATGLIISVCGAYLSWTIMAAEVPMVAAKHGAFPKI
FRHQNKNNAPAQSLWLTNSAVQVALVLIWLTGSNYNTLLTIASEMILVPYFLVGAFLFKVALKRQDWRLIVAASGACLYG
LWLIYAAGLVYLLLSVLLYAPGLLVFIYARKGHEGLRLLNTVERAAIFLVLLATIPATWLMMH
>Mature_463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAEVASPAALLIGWSITGIGIIFLAFAMLLLTRLRPDLDGGIFTYAKEGFG
DLIGFFSAWGYWLCAVIANVSYLVIVFAALSFFTDKSGSIIFGEGNTWQALLGASFLLWLVHALVLRGVQTAASINLAAT
LAKLLPIGGFIILAGIAFSLDTFSIDFTGLALHTPVWQQVKDTMLITLWVFIGVEGAVVVSARARNKKDVGRATMLAVIS
ALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMIGPWGEIIIATGLIISVCGAYLSWTIMAAEVPMVAAKHGAFPKI
FRHQNKNNAPAQSLWLTNSAVQVALVLIWLTGSNYNTLLTIASEMILVPYFLVGAFLFKVALKRQDWRLIVAASGACLYG
LWLIYAAGLVYLLLSVLLYAPGLLVFIYARKGHEGLRLLNTVERAAIFLVLLATIPATWLMMH

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=462, Percent_Identity=75.1082251082251, Blast_Score=687, Evalue=0.0,
Organism=Escherichia coli, GI1786908, Length=418, Percent_Identity=27.7511961722488, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI2367353, Length=341, Percent_Identity=29.3255131964809, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1790575, Length=448, Percent_Identity=25.4464285714286, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49871; Mature: 49871

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAEVASPAALLIGWSITGIGIIFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHH
TRLRPDLDGGIFTYAKEGFGDLIGFFSAWGYWLCAVIANVSYLVIVFAALSFFTDKSGSI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IFGEGNTWQALLGASFLLWLVHALVLRGVQTAASINLAATLAKLLPIGGFIILAGIAFSL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DTFSIDFTGLALHTPVWQQVKDTMLITLWVFIGVEGAVVVSARARNKKDVGRATMLAVIS
EEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMIGPWGEIIIATGLIISVCGAYLSW
HHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPMVAAKHGAFPKIFRHQNKNNAPAQSLWLTNSAVQVALVLIWLTGSNYNTLLT
HHHHHHCCHHHHCCCCCHHHHHCCCCCCCCHHHHEECHHHHHHHHHEEEEECCCCCHHHH
IASEMILVPYFLVGAFLFKVALKRQDWRLIVAASGACLYGLWLIYAAGLVYLLLSVLLYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLVFIYARKGHEGLRLLNTVERAAIFLVLLATIPATWLMMH
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAEVASPAALLIGWSITGIGIIFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHH
TRLRPDLDGGIFTYAKEGFGDLIGFFSAWGYWLCAVIANVSYLVIVFAALSFFTDKSGSI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IFGEGNTWQALLGASFLLWLVHALVLRGVQTAASINLAATLAKLLPIGGFIILAGIAFSL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DTFSIDFTGLALHTPVWQQVKDTMLITLWVFIGVEGAVVVSARARNKKDVGRATMLAVIS
EEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMIGPWGEIIIATGLIISVCGAYLSW
HHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPMVAAKHGAFPKIFRHQNKNNAPAQSLWLTNSAVQVALVLIWLTGSNYNTLLT
HHHHHHCCHHHHCCCCCHHHHHCCCCCCCCHHHHEECHHHHHHHHHEEEEECCCCCHHHH
IASEMILVPYFLVGAFLFKVALKRQDWRLIVAASGACLYGLWLIYAAGLVYLLLSVLLYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLVFIYARKGHEGLRLLNTVERAAIFLVLLATIPATWLMMH
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]