Click here to switch to the map view.

The map label for this gene is lpp1 [H]

Identifier: 170024093

GI number: 170024093

Start: 2059668

End: 2059904

Strand: Reverse

Name: lpp1 [H]

Synonym: YPK_1854

Alternate gene names: 170024093

Gene position: 2059904-2059668 (Counterclockwise)

Preceding gene: 170024094

Following gene: 170024083

Centisome position: 43.93

GC content: 46.41

Gene sequence:

>237_bases
ATGAATCGTACTAAACTTGTACTGGGCGCGGTAATTCTGGCTTCTACAATGCTGGCTGGTTGTTCAAGCAATGCTAAAAT
CGATCAACTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGATCAACTGAGCAACGACGTGAACGCAGTGCGCGCTG
ACGTTCAAGCAGCTAAAGACGATGCAGCACGTGCTAACCAACGTCTTGACAACCAAGCTCAAGCTTACAAGAAGTAA

Upstream 100 bases:

>100_bases
TAAACCCTCTTAATACTAAAATTTTATTCTCTTTCGAAAAAACTTTGTGTAATACTTGTAAGGCTACATGGAGATTAACT
TAATCTAGAGGGTGTTAATA

Downstream 100 bases:

>100_bases
TATTACTTCCTGAATGAAAAATGGCGCACATTGTGCGCCATTTTTTTGCCCTACGGAAATGTTTGTCGTACAGAAATGAA
CGTCTGACAATCGCTCTCCT

Product: LPP repeat-containing protein

Products: NA

Alternate protein names: Murein-lipoprotein 1 [H]

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MNRTKLVLGAVILASTMLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAVRADVQAAKDDAARANQRLDNQAQAYKK

Sequences:

>Translated_78_residues
MNRTKLVLGAVILASTMLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAVRADVQAAKDDAARANQRLDNQAQAYKK
>Mature_78_residues
MNRTKLVLGAVILASTMLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAVRADVQAAKDDAARANQRLDNQAQAYKK

Specific function: Interacts with the peptidoglycan both covalently and noncovalently [H]

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Cell outer membrane; Peptidoglycan-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Lpp family [H]

Homologues:

Organism=Escherichia coli, GI1787967, Length=78, Percent_Identity=87.1794871794872, Blast_Score=132, Evalue=4e-33,
Organism=Escherichia coli, GI1789390, Length=70, Percent_Identity=50, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006817
- InterPro:   IPR016367
- InterPro:   IPR023147 [H]

Pfam domain/function: PF04728 LPP [H]

EC number: NA

Molecular weight: Translated: 8317; Mature: 8317

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTKLVLGAVILASTMLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAVRADVQAAKD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAARANQRLDNQAQAYKK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRTKLVLGAVILASTMLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAVRADVQAAKD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAARANQRLDNQAQAYKK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA