| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024045
Identifier: 170024045
GI number: 170024045
Start: 2006761
End: 2007969
Strand: Reverse
Name: 170024045
Synonym: YPK_1806
Alternate gene names: NA
Gene position: 2007969-2006761 (Counterclockwise)
Preceding gene: 170024046
Following gene: 170024043
Centisome position: 42.82
GC content: 49.79
Gene sequence:
>1209_bases ATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCGACCTTAATGCATTTTC TCGTATGCTGACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATCCCC CTAAATCAGGCTCGAATACCCGCAACGGCTATTCGTCCAAAACACTGCTATGCGACGACGGCGAAATCGAGCTGAATACG CCACGCGACCGCGAAAACACCTTTGAACCGCAGCTGATAAAGAAAAATCAGACGCGTATCACACAGATGGACAGCCAGAT TTTGTCCCTGTACGCCAAAGGCATGACCACCCGCGAAATCGTCGCCACCTTCAAAGAGATGTATGACGCCGATGTGTCTC CCACGCTGATATCTAAAGTCACCGATGCCGTAAAAGAGCAGGTTGCTGAATGGCAAAACCGCCAACTGGATGCTCTGTAT CCCATTGTTTATATGGACTGCATTGTCGTAAAAGTCCGCCAGAACGGTAGCGTGATAAACAAAGCAGTGTTCCTAGCGCT GGGCATCAACACTGAAGGTCAGAAAGAGCTGCTGGGCATGTGGCTGGCAGAAAATGAAGGTGCGAAGTTCTGGCTAAGTG TGCTGACAGAGCTGAAAAATCGCGGTCTTCAGGACATTCTGATTGCCTGCGTGGATGGCCTGAAGGGGTTCCCGGATGCG ATAAACAGTGTTTATCCGCAGACTCACATCCAGCTGTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATG GAAGGACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACAGAAGAGGCGGCGCTGATGGCGCTGG ATAAGTTTGCGGAGGCCTGGGACGACAAATACCCGCAAATTAGCAAAAGTTGGCGTACGCACTGGGAAAATCTCAATACA TTCTTCGGCTATCCGCCCGATATCCGCAAGGCTATCTACACCACGAATGCCATCGAATCGGTGAACAGCGTGATCCGTGC AGCCATTAAAAAGCGCAAAGTGTTCCCGACAGACGACTCAGTGCGGAAGGTTGTTTATTTGGCGATCAAGGATGCATCAA AAAAATGGAGTATGCCGATCCAGAACTGGCGGTTAGCGATGAGCCGTTTTATTATCGAGTTCGGTGACCGCCTGAGCGAT CACCTTTAA
Upstream 100 bases:
>100_bases TCGGGCACGAGAAAAATACCCCTAAATCAGAGACTGTAAACAATATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCA ACAACGGAGACAGGCAAATT
Downstream 100 bases:
>100_bases TACGGTGGCAGTTACACAGAATTATGGACAGGCTCCCGAATATATTTTAGAGAAAATCATCCCGTTTAGGCGTAAAAGTA TCAATCAAGATGCTGTTGTC
Product: transposase mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNPPKSGSNTRNGYSSKTLLCDDGEIELNT PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNT FFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD HL
Sequences:
>Translated_402_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNPPKSGSNTRNGYSSKTLLCDDGEIELNT PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNT FFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD HL >Mature_402_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNPPKSGSNTRNGYSSKTLLCDDGEIELNT PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNT FFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD HL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45666; Mature: 45666
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNPPKSGSNT CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREI CCCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH VATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVIN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHH KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDS CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL HHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNPPKSGSNT CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREI CCCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH VATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVIN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHH KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDS CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL HHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]