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The map label for this gene is yesO [H]

Identifier: 170024037

GI number: 170024037

Start: 1998052

End: 1999344

Strand: Reverse

Name: yesO [H]

Synonym: YPK_1798

Alternate gene names: 170024037

Gene position: 1999344-1998052 (Counterclockwise)

Preceding gene: 170024038

Following gene: 170024036

Centisome position: 42.64

GC content: 41.07

Gene sequence:

>1293_bases
ATGAAAAAAGCGATCCTACACACGCTAATAGCATCCACTCTGGCTCTATTGTCACATCAAGCTTTTGCAGCACAGGACGA
CGTCAATTTACGGATGTCATGGTGGGGAGGGAACGGCCGCCACCAGGTAACATTGAAAGCTCTGGAAGAATTCCATAAAC
AACATCCGAATATTAATGTTAAAGCGGAATATACCGGTTGGGATGGCCATTTATCTCGTTTGACTACACAGATTGCAGGC
GGTACTGAACCTGATGTCATGCAGACTAACTGGAACTGGCTGCCTATTTTTTCTAAAGACGGAACAGGATTCTTCGATTT
AAATAACGTAAAAGAACAACTGGATTTGGCGCAATTCGATCCAATCGAACTGCAACAGACTACCGTTAATGGCAAACTGA
ATGGTATTCCGATCTCTGTTACTGCACGTATATTCTATTTCAATGATGCGACCTGGGCTAAAGCAGGTTTAGAATATCCA
AAGACATGGGATGAGTTACTCAACGCAGGCCAAGTATTTAAAGAAAAATTGGGTGACCAATATTACCCTGTTGTATTAGA
GCATCAAGATACTTTAGCGTTAATCCGTTCTTATATGACACAGAAATACAATATTCCTACCGTTGATGAAGCAAATAAGA
AATTTGCCTACACACCAGAGCAGTGGGTTGAGTTCTTTACCATGTACAAAAAGATGGTAGATAGCCATGTTATGCCATCT
TCCAAATACTATGCTTCATTCGGTAAGAGTAATATGTACGAAATGAAGCCGTGGATTAATGGTGAGTGGGCAGGAACTTA
TATGTGGAACTCAACCATTACTAAATACTCTGATAACCTGACCAAACCTGCAAAGTTAGATCTGGGCCCATATCCAATGT
TGCCTGATGCAAAAGATGCTGGCTTATTCTTTAAACCTGCACAAATGCTCTCAATTGGTAAATCAACTAAGCATCCTAAA
GAAAGTGCGATGCTAATTAACTTCCTGCTAAACAGCAAAGAAGGTGTTGATGCATTAGGCCTTGAACGCGGTGTACCGCT
GAGCGCAGCAGCTGTAGCCCAATTGCGTGCCAATGGTGTGATTAAAGATGAAGATCCTTCTGTTGCCGGTTTGAATATGG
CATTGGAATTACCACATGAAATGAAGACCTCACCGTACTTCGATGATCCACAAATTGTTTCACTGTTCGGTGATGCAATT
CAATATATAGACTATGGTCAGAAAAGCGTAGAAGAAACAGCAGAATACTTTAATAAGCAAGGTGATCGTATTCTTAAACG
TGCAATGCGTTAA

Upstream 100 bases:

>100_bases
CCTGCATCGCACCGTGTACTTCCAGTTTGATATGGATAAATGCCATATCTTTGATGCAAAAACAGAAAAAAATATCTCTC
TTTAACAGGAGCAGTACCCA

Downstream 100 bases:

>100_bases
TTAATCTAATTATTTAACTTAAGTCACAAAATAACCCTGCCATTTATTTGGTGGGGTTATTTTGTTTAATCAAATAAAAT
AACCCGCCAACTAGATCGGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKKAILHTLIASTLALLSHQAFAAQDDVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINVKAEYTGWDGHLSRLTTQIAG
GTEPDVMQTNWNWLPIFSKDGTGFFDLNNVKEQLDLAQFDPIELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLEYP
KTWDELLNAGQVFKEKLGDQYYPVVLEHQDTLALIRSYMTQKYNIPTVDEANKKFAYTPEQWVEFFTMYKKMVDSHVMPS
SKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLDLGPYPMLPDAKDAGLFFKPAQMLSIGKSTKHPK
ESAMLINFLLNSKEGVDALGLERGVPLSAAAVAQLRANGVIKDEDPSVAGLNMALELPHEMKTSPYFDDPQIVSLFGDAI
QYIDYGQKSVEETAEYFNKQGDRILKRAMR

Sequences:

>Translated_430_residues
MKKAILHTLIASTLALLSHQAFAAQDDVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINVKAEYTGWDGHLSRLTTQIAG
GTEPDVMQTNWNWLPIFSKDGTGFFDLNNVKEQLDLAQFDPIELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLEYP
KTWDELLNAGQVFKEKLGDQYYPVVLEHQDTLALIRSYMTQKYNIPTVDEANKKFAYTPEQWVEFFTMYKKMVDSHVMPS
SKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLDLGPYPMLPDAKDAGLFFKPAQMLSIGKSTKHPK
ESAMLINFLLNSKEGVDALGLERGVPLSAAAVAQLRANGVIKDEDPSVAGLNMALELPHEMKTSPYFDDPQIVSLFGDAI
QYIDYGQKSVEETAEYFNKQGDRILKRAMR
>Mature_430_residues
MKKAILHTLIASTLALLSHQAFAAQDDVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINVKAEYTGWDGHLSRLTTQIAG
GTEPDVMQTNWNWLPIFSKDGTGFFDLNNVKEQLDLAQFDPIELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLEYP
KTWDELLNAGQVFKEKLGDQYYPVVLEHQDTLALIRSYMTQKYNIPTVDEANKKFAYTPEQWVEFFTMYKKMVDSHVMPS
SKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLDLGPYPMLPDAKDAGLFFKPAQMLSIGKSTKHPK
ESAMLINFLLNSKEGVDALGLERGVPLSAAAVAQLRANGVIKDEDPSVAGLNMALELPHEMKTSPYFDDPQIVSLFGDAI
QYIDYGQKSVEETAEYFNKQGDRILKRAMR

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48669; Mature: 48669

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAILHTLIASTLALLSHQAFAAQDDVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEE
KAEYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKDGTGFFDLNNVKEQLDLAQFD
EEEECCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHCCC
PIELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLEYPKTWDELLNAGQVFKEKLGDQ
CCEEEEEEECCEECCEEEEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
YYPVVLEHQDTLALIRSYMTQKYNIPTVDEANKKFAYTPEQWVEFFTMYKKMVDSHVMPS
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLDLGPYPMLPDAKDA
CHHHHHCCCCCCEEECCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GLFFKPAQMLSIGKSTKHPKESAMLINFLLNSKEGVDALGLERGVPLSAAAVAQLRANGV
CEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHCCC
IKDEDPSVAGLNMALELPHEMKTSPYFDDPQIVSLFGDAIQYIDYGQKSVEETAEYFNKQ
CCCCCCCEECCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
GDRILKRAMR
HHHHHHHHCC
>Mature Secondary Structure
MKKAILHTLIASTLALLSHQAFAAQDDVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEE
KAEYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKDGTGFFDLNNVKEQLDLAQFD
EEEECCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHCCC
PIELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLEYPKTWDELLNAGQVFKEKLGDQ
CCEEEEEEECCEECCEEEEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
YYPVVLEHQDTLALIRSYMTQKYNIPTVDEANKKFAYTPEQWVEFFTMYKKMVDSHVMPS
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLDLGPYPMLPDAKDA
CHHHHHCCCCCCEEECCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GLFFKPAQMLSIGKSTKHPKESAMLINFLLNSKEGVDALGLERGVPLSAAAVAQLRANGV
CEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHCCC
IKDEDPSVAGLNMALELPHEMKTSPYFDDPQIVSLFGDAIQYIDYGQKSVEETAEYFNKQ
CCCCCCCEECCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
GDRILKRAMR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]