| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yceF [C]
Identifier: 170023921
GI number: 170023921
Start: 1867846
End: 1868442
Strand: Reverse
Name: yceF [C]
Synonym: YPK_1680
Alternate gene names: 170023921
Gene position: 1868442-1867846 (Counterclockwise)
Preceding gene: 170023947
Following gene: 170023918
Centisome position: 39.84
GC content: 48.24
Gene sequence:
>597_bases ATGCCGCAACTGGTTCTTGCTTCAACATCTTCATATCGCCGTGCCTTGCTGGAAAAGCTCCAGTTACCCTTTATTACTGA TGCCCCTGAAACCGATGAAACCCCACACGCTGGGGAGCCAGCAGAAGCGCTGGTACAGCGGTTAGCATCAGCGAAAGCAC AGGCACTGGCCGGGCGTTATCCGCAACATTTAATCATCGGCTCAGATCAGGTCTGTGTGATTGACGGTAAAATAACCGGC AAGCCCCTTCAATATTCTACTGCCGTAAAACAATTGCAACAGGCCAGTGGCCAATGTGTCACTTTCTATACTGGACTCAC ACTGCTGAATACGGCAAATAACAGCATTAATTGCACATGTGAAACCTTTGATGTTTATTTCCGCACATTGAGCCAAGCCG AAATAGACGGTTATTTGCTACGGGAGCAACCCTGGAATTGTGCGGGAAGTTTTAAAAGTGAAGGTTTAGGTATCACATTG TTTGAGCGTTTAGCCGGGCGTGATCCGAATACGCTCATCGGGTTACCTTTAATTGCCCTCACCCAAATGCTGATTGAACA AGGCGTGAACCCCCTGACGGTAAAACCCGTCGAATGA
Upstream 100 bases:
>100_bases AAAAGGCCGTTTTACTGCACCTTTCACCAATATTCGCTTCCGAAGCGGCGAACAGTTTAAGATGCCTGATTAAATTACGC CATGGTTTATGGAAAATATT
Downstream 100 bases:
>100_bases TAAAGCCAGCCGAATTGTAAAAACAGTCGAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCATATGCGCCTATAAGGC TCTGTTACCAGCCGCGCCCT
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPQLVLASTSSYRRALLEKLQLPFITDAPETDETPHAGEPAEALVQRLASAKAQALAGRYPQHLIIGSDQVCVIDGKITG KPLQYSTAVKQLQQASGQCVTFYTGLTLLNTANNSINCTCETFDVYFRTLSQAEIDGYLLREQPWNCAGSFKSEGLGITL FERLAGRDPNTLIGLPLIALTQMLIEQGVNPLTVKPVE
Sequences:
>Translated_198_residues MPQLVLASTSSYRRALLEKLQLPFITDAPETDETPHAGEPAEALVQRLASAKAQALAGRYPQHLIIGSDQVCVIDGKITG KPLQYSTAVKQLQQASGQCVTFYTGLTLLNTANNSINCTCETFDVYFRTLSQAEIDGYLLREQPWNCAGSFKSEGLGITL FERLAGRDPNTLIGLPLIALTQMLIEQGVNPLTVKPVE >Mature_197_residues PQLVLASTSSYRRALLEKLQLPFITDAPETDETPHAGEPAEALVQRLASAKAQALAGRYPQHLIIGSDQVCVIDGKITGK PLQYSTAVKQLQQASGQCVTFYTGLTLLNTANNSINCTCETFDVYFRTLSQAEIDGYLLREQPWNCAGSFKSEGLGITLF ERLAGRDPNTLIGLPLIALTQMLIEQGVNPLTVKPVE
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=66.6666666666667, Blast_Score=261, Evalue=2e-71, Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=30.8108108108108, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21553; Mature: 21422
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLVLASTSSYRRALLEKLQLPFITDAPETDETPHAGEPAEALVQRLASAKAQALAGRY CCCEEEECCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PQHLIIGSDQVCVIDGKITGKPLQYSTAVKQLQQASGQCVTFYTGLTLLNTANNSINCTC CCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECEEEEECCCCCEEEEE ETFDVYFRTLSQAEIDGYLLREQPWNCAGSFKSEGLGITLFERLAGRDPNTLIGLPLIAL HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCHHHHH TQMLIEQGVNPLTVKPVE HHHHHHCCCCCEEEEECC >Mature Secondary Structure PQLVLASTSSYRRALLEKLQLPFITDAPETDETPHAGEPAEALVQRLASAKAQALAGRY CCEEEECCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PQHLIIGSDQVCVIDGKITGKPLQYSTAVKQLQQASGQCVTFYTGLTLLNTANNSINCTC CCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECEEEEECCCCCEEEEE ETFDVYFRTLSQAEIDGYLLREQPWNCAGSFKSEGLGITLFERLAGRDPNTLIGLPLIAL HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCHHHHH TQMLIEQGVNPLTVKPVE HHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]