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The map label for this gene is bssS [H]

Identifier: 170023914

GI number: 170023914

Start: 1858699

End: 1858953

Strand: Reverse

Name: bssS [H]

Synonym: YPK_1673

Alternate gene names: 170023914

Gene position: 1858953-1858699 (Counterclockwise)

Preceding gene: 170023915

Following gene: 170023913

Centisome position: 39.64

GC content: 40.0

Gene sequence:

>255_bases
ATGGACAGAAATAATGAAGTTATTCAGACTCACCCTGTCGTAGGTTGGGATATCAGTACTGTAGATGTGTACGATGCTAT
GATGATACGTCTTCATTACCTGTCTTCTATGGATCAACCACAAGAAGATGCGTTGGTTGATAGAACGCTCTGGCTTACGA
CCGATGTTGCACGCCAATTAATTAATATATTAGAAGCTGGTATTGCTAAAATTGAGTCATCAGAATATCTGGATATGGAC
CACCGTAAGCACTAA

Upstream 100 bases:

>100_bases
TTCATTGGCGGTTGAGTATACTAAAACAGCTCACTCGGTAATGAGCCGCATTGATCCTCGTTAGTCACTCAAGCCAGTAA
CTACTATATAAGGGGTCTTT

Downstream 100 bases:

>100_bases
TTTTTTGTCCATCAAATCATTTTTTTATTACCCATAAACAGGCACCAGTAAATATTATCTGGTGTCTTTTTATTAACCAC
TCCCTCCCTCATATGGCCAA

Product: biofilm formation regulatory protein BssS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MDRNNEVIQTHPVVGWDISTVDVYDAMMIRLHYLSSMDQPQEDALVDRTLWLTTDVARQLINILEAGIAKIESSEYLDMD
HRKH

Sequences:

>Translated_84_residues
MDRNNEVIQTHPVVGWDISTVDVYDAMMIRLHYLSSMDQPQEDALVDRTLWLTTDVARQLINILEAGIAKIESSEYLDMD
HRKH
>Mature_84_residues
MDRNNEVIQTHPVVGWDISTVDVYDAMMIRLHYLSSMDQPQEDALVDRTLWLTTDVARQLINILEAGIAKIESSEYLDMD
HRKH

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787299, Length=84, Percent_Identity=65.4761904761905, Blast_Score=119, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020273
- ProDom:   PD060858 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9769; Mature: 9769

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNNEVIQTHPVVGWDISTVDVYDAMMIRLHYLSSMDQPQEDALVDRTLWLTTDVARQL
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
INILEAGIAKIESSEYLDMDHRKH
HHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRNNEVIQTHPVVGWDISTVDVYDAMMIRLHYLSSMDQPQEDALVDRTLWLTTDVARQL
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
INILEAGIAKIESSEYLDMDHRKH
HHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]