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The map label for this gene is yddW [H]

Identifier: 170023818

GI number: 170023818

Start: 1744353

End: 1745636

Strand: Reverse

Name: yddW [H]

Synonym: YPK_1577

Alternate gene names: 170023818

Gene position: 1745636-1744353 (Counterclockwise)

Preceding gene: 170023825

Following gene: 170023817

Centisome position: 37.22

GC content: 51.48

Gene sequence:

>1284_bases
ATGTTGTTACATCTGAAAGGAAGCCACCGATTCATTAGCCTGATGCTCTGCGCATTATTACTCGCTGGCTGTGGACATCA
GCGGATGCCAGAGAAACCCGTGAGTCCGGTAGGGAAAGAAGAGCCGGTTCGTGGTGTCTGGCTAACCACCGTGCTCAGAC
TTGACTGGCCTTCACTTTCATCGATTAACGCTAGCTCAGACTCGATCAGGATCAGCACGCAAAAGAAAGAACTGACAGAC
ACATTAGATGACTTGGTGAAAAACGGCGTCAACACCCTTTTCTTTCAAGTAAAGCCGGATGGGAGCGCGCTTTATCATTC
AGCCATTCTTCCCTGGTCGGATGTTTTGACCGGTGTAACAGGTCAGGATCCCGGTTATGACCCTCTGGCCTTTGCGGTAT
CTGAAGCACATAAACGAGGGCTTAAGATACACGCGTGGCTGAACCCCTACCGTGTCTCAATGGATACCCGGCCGGAAACG
AGTGCATCACTTGAGCGCACGCTCTCTTCTTCGCCAGCCAGTGTCTACGCGCTGCATAAAGATTGGATACGCACCGCCAA
TGGCCGGTTTGTTCTCGATCCGGGGTTACCCGAGGTACGCCACTGGATCACCAATATTGTTGCCGAACTGGTCAAAAATT
ATGACATCGATGGCATACAGTTTGATGATTATTTCTATTATGAAACCCCGTCATCCCGGCTTGATGATGATGCCACATAC
CAGAAATATGGGCAGTCCTTCAGCGATAAGGCCAATTGGCGCAGGAACAATACGTTGTTGCTCATAAAACAGGTCTCTTC
AACCGTCAGGTCCCTTAAACCAGAGATTGAGTTTGGTGTCAGCCCGGCGGGCGTCTGGAGAAATCAGGCCGATGATCCCC
TAGGGTCAGAGACACAGGCAGGCAGCCCTTCTTACGATACCGCATATGCCGATACCCGTTTATGGGTGCAGGACGGTTTA
CTGGATTATATCGCACCACAACTCTACTGGACGCATAGCCAAAAAAAGGTCAAATATGACACGCTGGCAACATGGTGGGC
AGATACCGTCAGGCATAGCCACACCAAATTGTATATCGGCGTCGCGTTATACAAGGTTGGCCAACCCTCGCAGGCCGAAT
CTGACTGGGCACTGGAAGGCGGTGTGCCTGAGCTAAAGCGGCAACTGGATCTCAATGACGCGCTGCCGGAAATCAGCGGA
ACGATTCTGTTCAGGGAAGCGTTTCTCCGTCAGCCCCAGACGGAAGAGGCGGTGAAATATTTGAAGTCCAGGTGGCGTAA
CTGA

Upstream 100 bases:

>100_bases
AAGAACCTGCTCAGAGCTATATCCCAACGGCCTCTGAGCCACAATACCCGTTAAAGGGGATCAATAAATTCTGCATCCCC
CCGCATTTAAGGAATAGGTC

Downstream 100 bases:

>100_bases
AATCATAAAACGCAGCCATAGGCGGAGCCATTTTTAACCAAAAATTTGGCTCCCCACATGCATCGGTCTGTAAAAACAAT
ATTGATTAAAACCCAGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQAESDWALEGGVPELKRQLDLNDALPEISG
TILFREAFLRQPQTEEAVKYLKSRWRN

Sequences:

>Translated_427_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQAESDWALEGGVPELKRQLDLNDALPEISG
TILFREAFLRQPQTEEAVKYLKSRWRN
>Mature_427_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQAESDWALEGGVPELKRQLDLNDALPEISG
TILFREAFLRQPQTEEAVKYLKSRWRN

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=393, Percent_Identity=61.8320610687023, Blast_Score=536, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 48230; Mature: 48230

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLS
CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SINASSDSIRISTQKKELTDTLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVT
CCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCHHHHHCCCC
GQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPETSASLERTLSSSPASVYALHK
CCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEHH
DWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCHHH
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQA
HHHCCCCCHHCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCCCCCCCC
GSPSYDTAYADTRLWVQDGLLDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIG
CCCCCCCCCCCCCHHHHHCHHHHHCCHHEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEE
VALYKVGQPSQAESDWALEGGVPELKRQLDLNDALPEISGTILFREAFLRQPQTEEAVKY
EEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKSRWRN
HHHHCCC
>Mature Secondary Structure
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLS
CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SINASSDSIRISTQKKELTDTLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVT
CCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCHHHHHCCCC
GQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPETSASLERTLSSSPASVYALHK
CCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEHH
DWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCHHH
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQA
HHHCCCCCHHCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCCCCCCCC
GSPSYDTAYADTRLWVQDGLLDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIG
CCCCCCCCCCCCCHHHHHCHHHHHCCHHEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEE
VALYKVGQPSQAESDWALEGGVPELKRQLDLNDALPEISGTILFREAFLRQPQTEEAVKY
EEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKSRWRN
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]