| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is idnK [H]
Identifier: 170023816
GI number: 170023816
Start: 1742245
End: 1742781
Strand: Reverse
Name: idnK [H]
Synonym: YPK_1575
Alternate gene names: 170023816
Gene position: 1742781-1742245 (Counterclockwise)
Preceding gene: 170023817
Following gene: 170023815
Centisome position: 37.16
GC content: 50.84
Gene sequence:
>537_bases ATGTCTGGTAAATGCATTATTGTCATGGGTGTCTCTGGTACCGGCAAATCCTGTGTCGGTCAGGCGCTGGCATTGGCCCT TGGCGCTAAATTTATTGATGGCGACGATCTACACCCACGGGCCAATATCCAAAAAATGGCCGCCGGCCAGCCACTGAACG ATCAAGATCGTGCACCCTGGCTTGAGCGATTAAGTGATGTGGCGTATAGCCTGCAACAAAAAAACGAAGTGGGTTTTCTG GTGTGTTCAGCACTGAAAAAACAGTATCGAGACCGCCTGCGTGAAGGTAATGAAGGGATACGTTTTCTCTGGTTGACCGG TGATTACGATTTAGTGCTACACCGGATGCAGCAGCGGGCCGGGCATTTTATGCCAGAGAGCCTACTCAAGAGCCAGTTCG CCACGCTGGAAGCGCCGGGGAGCGATGAACCGGATGTGATTCCCATCGATATTTCATCTTCCATTGCCGATGTTGTTGAA CACTGTATTGCCGCATTGTCACTGGAAAACCACGTGAGCGCGATTCTTAGTGAATAG
Upstream 100 bases:
>100_bases TGTTAATGGTCATTTGCTGTTTGTTGATGGTGGCATGCTGGTAGCCGTTTAATCCAGGGTTCAGTCGTACTCCCCACATA ATGGGGAGCAGAGGAAAATT
Downstream 100 bases:
>100_bases CGGTGCTGAATGAATAGCGTTTTTTATTGAATGACGGTGCTTAACTGCGCGGACCCCATAAGGGGATAGGAAAAATAATG ATACTTGATGAACTAAAAAA
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFL VCSALKKQYRDRLREGNEGIRFLWLTGDYDLVLHRMQQRAGHFMPESLLKSQFATLEAPGSDEPDVIPIDISSSIADVVE HCIAALSLENHVSAILSE
Sequences:
>Translated_178_residues MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFL VCSALKKQYRDRLREGNEGIRFLWLTGDYDLVLHRMQQRAGHFMPESLLKSQFATLEAPGSDEPDVIPIDISSSIADVVE HCIAALSLENHVSAILSE >Mature_177_residues SGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPWLERLSDVAYSLQQKNEVGFLV CSALKKQYRDRLREGNEGIRFLWLTGDYDLVLHRMQQRAGHFMPESLLKSQFATLEAPGSDEPDVIPIDISSSIADVVEH CIAALSLENHVSAILSE
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=182, Percent_Identity=40.1098901098901, Blast_Score=137, Evalue=4e-33, Organism=Escherichia coli, GI1790719, Length=166, Percent_Identity=60.8433734939759, Blast_Score=221, Evalue=2e-59, Organism=Escherichia coli, GI87082265, Length=160, Percent_Identity=51.25, Blast_Score=185, Evalue=2e-48, Organism=Caenorhabditis elegans, GI25146487, Length=169, Percent_Identity=42.0118343195266, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6320454, Length=162, Percent_Identity=38.2716049382716, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 19448; Mature: 19317
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPW CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH LERLSDVAYSLQQKNEVGFLVCSALKKQYRDRLREGNEGIRFLWLTGDYDLVLHRMQQRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH GHFMPESLLKSQFATLEAPGSDEPDVIPIDISSSIADVVEHCIAALSLENHVSAILSE CCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGKCIIVMGVSGTGKSCVGQALALALGAKFIDGDDLHPRANIQKMAAGQPLNDQDRAPW CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH LERLSDVAYSLQQKNEVGFLVCSALKKQYRDRLREGNEGIRFLWLTGDYDLVLHRMQQRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH GHFMPESLLKSQFATLEAPGSDEPDVIPIDISSSIADVVEHCIAALSLENHVSAILSE CCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]