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The map label for this gene is 170023724

Identifier: 170023724

GI number: 170023724

Start: 1641141

End: 1642490

Strand: Direct

Name: 170023724

Synonym: YPK_1483

Alternate gene names: NA

Gene position: 1641141-1642490 (Clockwise)

Preceding gene: 170023723

Following gene: 170023725

Centisome position: 35.0

GC content: 47.7

Gene sequence:

>1350_bases
GTGAGAACTAACAAAGTCGTTTGGAGTGAGGGGCTTTTTCTTCGCCCACAACTTTTTCAACAGCAAGAGCGCTATCTTGA
ATATTACGCCCATAAGCGAGCGGCAACGATAACCCCATTCTTTTGGGGATTTGCGCAATATGAAATTGATAGAGAAGCGC
TCTCGTATGGCAAATTAGTATTGCGATCTGGGAAGGGCGTGTTACCCGACGGTACACCATTTGATATTCCCGGCCATGCT
GAATTGCCTGAACCGCTCACTATCACCCCAGAACATCTGGGTAAGTTGATCTATCTGGCGGTCCCACTGCGCCTGGATAA
CAGTGATGAAACCATTTTTGATGAGCACGATATGAGCTCATTGGCACGTTTTTACGCCTATGAAGCTGCGCTCAACGATA
CCAATGCCATTCGGCAAGGGCCGAAGCCGGTACAACTGTCAAGATTACGCCTCAGATTAGTCTCAGAAGGTGAGATGACA
GAATCATGGATTGGGCTGCCATTAACCAAAGTCAGAGCGATTCAGCCTGATGGTAGTGTCTTGCTACACACCGAAGATTA
TATTCCTCCGGTGACGGGTTATGCCGCAAGTTCATTGCTGTCTGAATGGTTAACCCATCTTAATGGTTTGGTTAAAATGC
GCGCAGAGATGTTGGCCAATCGCTTGTCAAACAGTGATGGGAAAGCGAGCGCCAGCGCAGAAATTGTCGATTATTTGCTA
CTGCAAATTTTTAATAAATATGAGCCGATTCTCGATCATTTAAGGCACATTCCTGAATTACCACCTATTACGCTTTATCA
GGAATTGGCTAAGTTCTCGGGGGAATTATCTACCTTTATCCGGACCAAAACCCGCCGACCCCGTCCGGCACCTGGCTATG
ATCATGCGAAGCTCTATGCGTCTATTCGTCCGTTGGTTGACGAAGTTCATGAACTACTGAACCAGATCTTGGTGCGTGCT
GGGCAGATGATACCGCTGGAGACGAAAGGCAATGGCGTTTGGTCTGCCTCCGTACTGCCTAATGAATTACGCTCGTTTTC
AAATCTGGTCCTTGCCGTTCATGCGCAATTACCGATGGATGTGCTACAGCATCAATTTTCAGTACAAACAAAAATCAGCG
CACCTCAGCAATTGCATGAACTGGTGCGATCGCATTTGCCAGGGTTGGAACTACAGCGTTTGCCAGTACCGCCCAGACAA
ATTCCGTATAGCGCAGGGTACGTTTATTTTGAATTGATAAAAAATGGCCCCTTCTGGGACAAGGTTTCCAATGCTGGTGC
CATTGCCCTGCACGTGGCGGGTGATTTCCCGGCCTTGAAAATGGAGCTCTGGGGGATTAGAGATTCATGA

Upstream 100 bases:

>100_bases
TTGGTATAAAAAAATGTGGCCAGGGCAAGACCAACAAGATCCGATCATGAAGGTACGCGTTGAGCGTCTGTCAATATCAA
TTAAAGAAATGGATTAAGCC

Downstream 100 bases:

>100_bases
GTGACAGCAGTGATTTGAACCTTGGGGGCTCAATGCCTCCTTTTGATCAAAGCAGAAATGTGGATGAGAGTCCGCAGGCA
TTAGGCCGGTTCTTGCTTGA

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS

Sequences:

>Translated_449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS
>Mature_449_residues
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHA
ELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMT
ESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRA
GQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQ
IPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50694; Mature: 50694

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLV
CCCCCEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSGKGVLPDGTPFDIPGHAELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSS
HCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCEEEEEEEEEECCCCCCCCCHHHHHH
LARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMTESWIGLPLTKVRAIQPDGSV
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCE
LLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SIRPLVDEVHELLNQILVRAGQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMD
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHEEEEECCCCHH
VLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQIPYSAGYVYFELIKNGPFWD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
KVSNAGAIALHVAGDFPALKMELWGIRDS
HHCCCCEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLV
CCCCCEEECCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSGKGVLPDGTPFDIPGHAELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSS
HCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCEEEEEEEEEECCCCCCCCCHHHHHH
LARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMTESWIGLPLTKVRAIQPDGSV
HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCE
LLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SIRPLVDEVHELLNQILVRAGQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMD
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHEEEEECCCCHH
VLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQIPYSAGYVYFELIKNGPFWD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
KVSNAGAIALHVAGDFPALKMELWGIRDS
HHCCCCEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA