| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yhjC [H]
Identifier: 170023661
GI number: 170023661
Start: 1566395
End: 1566592
Strand: Direct
Name: yhjC [H]
Synonym: YPK_1419
Alternate gene names: 170023661
Gene position: 1566395-1566592 (Clockwise)
Preceding gene: 170023660
Following gene: 170023662
Centisome position: 33.4
GC content: 35.35
Gene sequence:
>198_bases ATGAAATGGTATCATTCTCTCGTGTTGCTACCTGTATTATCATTAACTGTCGGTATTTTCTTTGTTAACAAAGTGGAACC TTTCATATTAGGTATGCCATTCCTTATGTTCTGGATCGTGATTTGGTTGATTCTGACCGCATTGATTATGGCCATAATCT CGAAATTGGATTCAAATATAAGTAAGGAGGAAGTATGA
Upstream 100 bases:
>100_bases TCGCGGAGGCGAGGCCGCTGGATGGGCTGAGTAATAAACGCAGCCAACGCACATGCAGCTTGAAGTATGACGGGTATATG CTACGCAGTAGGAGTTAACT
Downstream 100 bases:
>100_bases ATGCGCCATTAATTATAATATGTACATTCTTCCTGTTTAGTATTTATCTTGCCATTCGCTCTAAAAAAGGCAAGAAGATG GACCATGAAGGGTGGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MKWYHSLVLLPVLSLTVGIFFVNKVEPFILGMPFLMFWIVIWLILTALIMAIISKLDSNISKEEV
Sequences:
>Translated_65_residues MKWYHSLVLLPVLSLTVGIFFVNKVEPFILGMPFLMFWIVIWLILTALIMAIISKLDSNISKEEV >Mature_65_residues MKWYHSLVLLPVLSLTVGIFFVNKVEPFILGMPFLMFWIVIWLILTALIMAIISKLDSNISKEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021741 [H]
Pfam domain/function: PF11755 DUF3311 [H]
EC number: NA
Molecular weight: Translated: 7523; Mature: 7523
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWYHSLVLLPVLSLTVGIFFVNKVEPFILGMPFLMFWIVIWLILTALIMAIISKLDSNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SKEEV CCCCC >Mature Secondary Structure MKWYHSLVLLPVLSLTVGIFFVNKVEPFILGMPFLMFWIVIWLILTALIMAIISKLDSNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SKEEV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]