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The map label for this gene is yhcH [C]

Identifier: 170023647

GI number: 170023647

Start: 1548475

End: 1548945

Strand: Direct

Name: yhcH [C]

Synonym: YPK_1405

Alternate gene names: 170023647

Gene position: 1548475-1548945 (Clockwise)

Preceding gene: 170023646

Following gene: 170023648

Centisome position: 33.02

GC content: 48.2

Gene sequence:

>471_bases
ATGATCAGTGGATCCTTGGCACAACCGGCGTTTTTCAGTGGGTTACCTGAACGTCTTCAATGGGTATTAGCTTATCTGGC
GGATATGCCTTTAGCGCAGTTAAGCTGCGGGCGGCATGAGATAGACGGTGAGTTGATGTTTATGAATGTCATGGCGTTTG
ATACTCAACCCGCAGAGAGTAAGAAAGCAGAGCTGCATCGTACCTACGCCGATGTGCAATTGCTGATCAGCGGCATTGAG
GGGATTGAGTATTCGACCCTGACACCGACAGAACATCTGGAGCCTTATCACCCTGATGATGATTATCAGCTCATCGCCGA
TATTCCAGATAAAAGCCAGTTACGTATGTTGCCCGGCATGTTTGCGGTATTTTTACCGGGAGAGCCACATAAGCCAGGCT
GCCAGATAGCCGGTTCTGGTGCTATCAAAAAGGTGGTCGTGAAGGTTCATTATAGTCTTTTGAATAGCTAG

Upstream 100 bases:

>100_bases
GGCCAGAGCATCGTTGTGATCACGATCAGTGATATACCGTTATTGAGTCACTTACCGTTATCAGTAAATATACCGTCATC
AGTCAATATCGAGGCATAAC

Downstream 100 bases:

>100_bases
TTATCTTTCTGATTTTATATCATAAGAAAAACAGCGTTTTTGACCTTTTTACCCGGTTTTCCGGGTTTTTTTATTGATCT
TATCCCGTACACCTCCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQIAGSGAIKKVVVKVHYSLLNS

Sequences:

>Translated_156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQIAGSGAIKKVVVKVHYSLLNS
>Mature_156_residues
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIE
GIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQIAGSGAIKKVVVKVHYSLLNS

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcH [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=106, Percent_Identity=49.0566037735849, Blast_Score=113, Evalue=7e-27,
Organism=Escherichia coli, GI1790001, Length=156, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI87082398, Length=135, Percent_Identity=30.3703703703704, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17258; Mature: 17258

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAES
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCH
KKAELHRTYADVQLLISGIEGIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCE
FAVFLPGEPHKPGCQIAGSGAIKKVVVKVHYSLLNS
EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAES
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCH
KKAELHRTYADVQLLISGIEGIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCE
FAVFLPGEPHKPGCQIAGSGAIKKVVVKVHYSLLNS
EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9719565; 10675023 [H]