Click here to switch to the map view.

The map label for this gene is 170023613

Identifier: 170023613

GI number: 170023613

Start: 1509812

End: 1510489

Strand: Reverse

Name: 170023613

Synonym: YPK_1371

Alternate gene names: NA

Gene position: 1510489-1509812 (Counterclockwise)

Preceding gene: 170023614

Following gene: 170023612

Centisome position: 32.21

GC content: 50.88

Gene sequence:

>678_bases
ATGACCGATAATACATTAACGCCGCAGATGCTTACTGGCCTTTCGACAGATCATTTGGTGGTGTTAAGTGGCGCTCATCG
CCTACAGCCACAGGCGGCTGAGGCTTTTCAAGCAATGCAACAGGCCGCTAAAGTTGCGGGGTTTGATTTACAACCCGCCA
GTACTTTTCGCGATTTTGGCCGCCAATTGGCTATTTGGAATGGCAAATTTCGCGGTGAGCGGCCAGTATTAGATCAAGAC
AGCCAGCCGATAGATATTTTCTCGTTAGATACCGCAGCCCGTTGTGAGGCGATATTGCGTTGGTCCGCTCTGCCGGGAAC
CAGCCGCCATCATTGGGGTAGCGACCTGGATATTTACGATCCATCGCGGCTACCAACGGGTGAAAAACTACAGCTAGAGC
CATGGGAATACGATGCGGGTGGCTATTTCTATCCGCTCACCCAATGGTTAAGTGCCCATATGGCAGAATTTGGTTTTTAC
CGACCATTCGCTACAGATAATGGGGGCGTCGCGGTGGAACCCTGGCATTTGAGTTACCGCCCTTTGGCAGAACAAGCGGA
GCATTTGCTGACCCCCAAGATTCTACTGGCGGCTTGGCAATCACAAGATGTGGCGGGCAGTGAATGGCTGGCAAGTCATT
TGCCGATGATTTTTTCACGATTTATCTACCTTAAATAG

Upstream 100 bases:

>100_bases
CAGTTAATGCCACCATTCATAAAGTTAATGAATGTGTTAGCGCGGCTGATTTACAATTGCTCAGCCGTATGTACCAGAAA
ATCATGGAACAATTGATCGC

Downstream 100 bases:

>100_bases
TGCGAGTTGCCGGAAGGCAGACAACTTGAAATATGACAGGTATTGCCACAACCAAAGGAATTTAACCATGCAATGGTTAG
CTGATTACTGGTGGATCATT

Product: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTDNTLTPQMLTGLSTDHLVVLSGAHRLQPQAAEAFQAMQQAAKVAGFDLQPASTFRDFGRQLAIWNGKFRGERPVLDQD
SQPIDIFSLDTAARCEAILRWSALPGTSRHHWGSDLDIYDPSRLPTGEKLQLEPWEYDAGGYFYPLTQWLSAHMAEFGFY
RPFATDNGGVAVEPWHLSYRPLAEQAEHLLTPKILLAAWQSQDVAGSEWLASHLPMIFSRFIYLK

Sequences:

>Translated_225_residues
MTDNTLTPQMLTGLSTDHLVVLSGAHRLQPQAAEAFQAMQQAAKVAGFDLQPASTFRDFGRQLAIWNGKFRGERPVLDQD
SQPIDIFSLDTAARCEAILRWSALPGTSRHHWGSDLDIYDPSRLPTGEKLQLEPWEYDAGGYFYPLTQWLSAHMAEFGFY
RPFATDNGGVAVEPWHLSYRPLAEQAEHLLTPKILLAAWQSQDVAGSEWLASHLPMIFSRFIYLK
>Mature_224_residues
TDNTLTPQMLTGLSTDHLVVLSGAHRLQPQAAEAFQAMQQAAKVAGFDLQPASTFRDFGRQLAIWNGKFRGERPVLDQDS
QPIDIFSLDTAARCEAILRWSALPGTSRHHWGSDLDIYDPSRLPTGEKLQLEPWEYDAGGYFYPLTQWLSAHMAEFGFYR
PFATDNGGVAVEPWHLSYRPLAEQAEHLLTPKILLAAWQSQDVAGSEWLASHLPMIFSRFIYLK

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 25347; Mature: 25216

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNTLTPQMLTGLSTDHLVVLSGAHRLQPQAAEAFQAMQQAAKVAGFDLQPASTFRDFG
CCCCCCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
RQLAIWNGKFRGERPVLDQDSQPIDIFSLDTAARCEAILRWSALPGTSRHHWGSDLDIYD
CEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PSRLPTGEKLQLEPWEYDAGGYFYPLTQWLSAHMAEFGFYRPFATDNGGVAVEPWHLSYR
CCCCCCCCCEEECCCEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC
PLAEQAEHLLTPKILLAAWQSQDVAGSEWLASHLPMIFSRFIYLK
CHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDNTLTPQMLTGLSTDHLVVLSGAHRLQPQAAEAFQAMQQAAKVAGFDLQPASTFRDFG
CCCCCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
RQLAIWNGKFRGERPVLDQDSQPIDIFSLDTAARCEAILRWSALPGTSRHHWGSDLDIYD
CEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PSRLPTGEKLQLEPWEYDAGGYFYPLTQWLSAHMAEFGFYRPFATDNGGVAVEPWHLSYR
CCCCCCCCCEEECCCEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC
PLAEQAEHLLTPKILLAAWQSQDVAGSEWLASHLPMIFSRFIYLK
CHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]