Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170023612
Identifier: 170023612
GI number: 170023612
Start: 1509550
End: 1509744
Strand: Reverse
Name: 170023612
Synonym: YPK_1370
Alternate gene names: NA
Gene position: 1509744-1509550 (Counterclockwise)
Preceding gene: 170023613
Following gene: 170023607
Centisome position: 32.19
GC content: 42.05
Gene sequence:
>195_bases ATGCAATGGTTAGCTGATTACTGGTGGATCATTCTTATCCTGTTAGTGGGAATGATATTAAACGGCATTAAAGAGTTACG CCGTCTTGATCATAAGCGTTTTTTGGACAATAAACCGGAGCTACCGCCCCACCGTGACAATAATGCCCAGTGGGATGATG AAGATGACTGGCCGGATCAAAATAAGAAAAAGTAA
Upstream 100 bases:
>100_bases ATGATTTTTTCACGATTTATCTACCTTAAATAGTGCGAGTTGCCGGAAGGCAGACAACTTGAAATATGACAGGTATTGCC ACAACCAAAGGAATTTAACC
Downstream 100 bases:
>100_bases GCAAGCCGCAAATAATATTCCATGCGGCGCTACCGCCTTATTCACCAATTGACGATGGCATAATTTATAACCGTGACAGT CCCACGCTCTTGTTCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MQWLADYWWIILILLVGMILNGIKELRRLDHKRFLDNKPELPPHRDNNAQWDDEDDWPDQNKKK
Sequences:
>Translated_64_residues MQWLADYWWIILILLVGMILNGIKELRRLDHKRFLDNKPELPPHRDNNAQWDDEDDWPDQNKKK >Mature_64_residues MQWLADYWWIILILLVGMILNGIKELRRLDHKRFLDNKPELPPHRDNNAQWDDEDDWPDQNKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0370 family
Homologues:
Organism=Escherichia coli, GI87082110, Length=49, Percent_Identity=67.3469387755102, Blast_Score=72, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1253_YERP3 (A7FG55)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001400233.1 - STRING: A7FG55 - GeneID: 5387728 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_1253 - eggNOG: NOG08235 - HOGENOM: HBG416643 - OMA: DDWPKKK - ProtClustDB: PRK13664 - BioCyc: YPSE349747:YPSIP31758_1253-MONOMER - HAMAP: MF_01566 - InterPro: IPR020910
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7896; Mature: 7896
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1423f1dc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWLADYWWIILILLVGMILNGIKELRRLDHKRFLDNKPELPPHRDNNAQWDDEDDWPDQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NKKK CCCH >Mature Secondary Structure MQWLADYWWIILILLVGMILNGIKELRRLDHKRFLDNKPELPPHRDNNAQWDDEDDWPDQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NKKK CCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA