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The map label for this gene is 170023443

Identifier: 170023443

GI number: 170023443

Start: 1331575

End: 1332966

Strand: Reverse

Name: 170023443

Synonym: YPK_1197

Alternate gene names: NA

Gene position: 1332966-1331575 (Counterclockwise)

Preceding gene: 170023444

Following gene: 170023442

Centisome position: 28.42

GC content: 53.45

Gene sequence:

>1392_bases
GTGCGAAAGAAATTTATCCCCCACGAATACCAAAACCAAATAATCCTTCACGAAATAGACGCCCCCCGCTCAAATGTTTG
GGCCGGTATGGGAATGGGTAAAACCGTCGCAACGCTTACTAGCCTTGAAGATCTGTTTATGTCTGGCAGTGAAACCCAAC
CGACGTTAGTTCTCGCACCTTTGCGGGTTGCTCGGTCTACGTGGCCAGATGAAGTGGATAAGTGGGATCACCTGCGCAAT
ATCGAAATGCAACCGGTGGTCGGTACCGCGCAGGAACGTTTAGCTGCGCTGCGTAACCCTAACGCCAGCGTGTTCACCAC
CAATTACGATAATCTCGTTTGGCTGATAGAAGCCCTCAACGGTGAATGGCCGTTTGGTACCGTTATCGCCGATGAAAGTA
CCCGGCTGAAATCCTTTCGCCTGCGCAAAGGCGGGAAGCGTGCGGCGGCACTGGCAAAAGTTGCGCACAGATCAGGCCGT
TGGGTGAATCTCTCCGGTACCCCTGCGCCAAATGGCTTACAGGATTTGTGGGGGCAAGCGTGGTTTCTGGATAAAGGCCA
GCGGCTAGGCCGAACATTCAGCGCTTTCACTGATCGCTGGTTTAACCGCATCCCGATCGGCACTACCGGTTTTAATAAAA
TCGAACCACGAGAGTGCGCACAGCAGCAAATGCAAGACGCCCTGCGCGACGTCACTATCTCCCTTAATGCCGCCGATTGG
TTCGACATTGACGAGCCGATACATAGCGTGGTGCGCGTTGGCCTTAGTCCTAAAGCCCGCAGCCAGTACAAAGAAATGGA
AAAGGAGATGTTTTTGCAAATTGGCGACCACGGTATCGAAGCCATGAACGCAGCGTCTAAAACAATGAAGTGTTTACAGC
TTGCCAGTGGCGCTATCTATACCGATGAGGCGGGCAACTGGACGGAGATACATGACGCCAAGCTGCAAGCGTTGGAAAGC
ATCATCACCGAGGCCAGCGGTATGCCTGTTCTCGTCGCTTACCATTTCAAAAGCGACTTAGCCCGCCTGTTAAAAGCCTT
TCCCAAAGGTCGCCACCTGGACGCAGACCCACAGACGCAGCGAGATTGGAACGCAGGATTAATACCCGTGCTATTCGCCC
ACCCCGCCAGCGCAGGCCACGGCCTTAATTTGCAGGACGGCGGCAACATTCTGGCGTTCTTCTCCCACTGGTGGGATCTG
GAACAGTATCAGCAAATCATTGAGCGTATAGGCCCCACACGGCAAGCACAGGCAGGCCACAAACGCCCGGTATGGATTTA
CCACATCATCGCCGAGGACACGGTAGACGAGCTGGTAAAAGAACGGCGGGATTCAAAACGCGAAGTACAAGACATCTTAC
TTGAGGCCATGAAAAAGAGGGGCTTACGATGA

Upstream 100 bases:

>100_bases
ACTCCGAAGGGACTGACCAGGCTATCCCAGCTAATGAACCAGCAGGCTGCATAAGATAGCCAGCCCTGCCAAGTGCGGGG
CTTTTTACAGGAATAACAGT

Downstream 100 bases:

>100_bases
TTAACGAGACGAAAACCACGAATCCCGACTGGCTCACCCCCGAGCAGACTTGCATACTGCTGGGAGGTATTACGACAAAA
ACCTTACGTGATTGGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: SNF2 Domain Protein; SNF2 Domain-Containing Protein; SNF2-Like Protein; SNF2 Family DNA/RNA Helicase; Phage-Associated Helicase; Helicase; Phage Related DNA Helicase; DNA/RNA Helicase Superfamily II SNF2 Family; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Phage-Related DNA Helicase; Snf2 Family Helicase; Phage-Associated Helicase Snf2 Family; SNF2 Family Helicase; SNF2 Related Protein; SWI/SNF Chromatin-Remodeling Complex Subunit; Prophage; SNF2 Family Protein; SNF2/Helicase Domain Protein; Helicase Domain-Containing Protein; Phage-Associated Protein; Phage DNA Helicase Partial; APSE-2 Prophage; SNF2

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MRKKFIPHEYQNQIILHEIDAPRSNVWAGMGMGKTVATLTSLEDLFMSGSETQPTLVLAPLRVARSTWPDEVDKWDHLRN
IEMQPVVGTAQERLAALRNPNASVFTTNYDNLVWLIEALNGEWPFGTVIADESTRLKSFRLRKGGKRAAALAKVAHRSGR
WVNLSGTPAPNGLQDLWGQAWFLDKGQRLGRTFSAFTDRWFNRIPIGTTGFNKIEPRECAQQQMQDALRDVTISLNAADW
FDIDEPIHSVVRVGLSPKARSQYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALES
IITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHGLNLQDGGNILAFFSHWWDL
EQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKERRDSKREVQDILLEAMKKRGLR

Sequences:

>Translated_463_residues
MRKKFIPHEYQNQIILHEIDAPRSNVWAGMGMGKTVATLTSLEDLFMSGSETQPTLVLAPLRVARSTWPDEVDKWDHLRN
IEMQPVVGTAQERLAALRNPNASVFTTNYDNLVWLIEALNGEWPFGTVIADESTRLKSFRLRKGGKRAAALAKVAHRSGR
WVNLSGTPAPNGLQDLWGQAWFLDKGQRLGRTFSAFTDRWFNRIPIGTTGFNKIEPRECAQQQMQDALRDVTISLNAADW
FDIDEPIHSVVRVGLSPKARSQYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALES
IITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHGLNLQDGGNILAFFSHWWDL
EQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKERRDSKREVQDILLEAMKKRGLR
>Mature_463_residues
MRKKFIPHEYQNQIILHEIDAPRSNVWAGMGMGKTVATLTSLEDLFMSGSETQPTLVLAPLRVARSTWPDEVDKWDHLRN
IEMQPVVGTAQERLAALRNPNASVFTTNYDNLVWLIEALNGEWPFGTVIADESTRLKSFRLRKGGKRAAALAKVAHRSGR
WVNLSGTPAPNGLQDLWGQAWFLDKGQRLGRTFSAFTDRWFNRIPIGTTGFNKIEPRECAQQQMQDALRDVTISLNAADW
FDIDEPIHSVVRVGLSPKARSQYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALES
IITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHGLNLQDGGNILAFFSHWWDL
EQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKERRDSKREVQDILLEAMKKRGLR

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324864, Length=468, Percent_Identity=25.4273504273504, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52317; Mature: 52317

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKFIPHEYQNQIILHEIDAPRSNVWAGMGMGKTVATLTSLEDLFMSGSETQPTLVLAP
CCCCCCCHHHHCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC
LRVARSTWPDEVDKWDHLRNIEMQPVVGTAQERLAALRNPNASVFTTNYDNLVWLIEALN
HHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEEHHC
GEWPFGTVIADESTRLKSFRLRKGGKRAAALAKVAHRSGRWVNLSGTPAPNGLQDLWGQA
CCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCE
WFLDKGQRLGRTFSAFTDRWFNRIPIGTTGFNKIEPRECAQQQMQDALRDVTISLNAADW
EEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCC
FDIDEPIHSVVRVGLSPKARSQYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIY
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEE
TDEAGNWTEIHDAKLQALESIITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQ
ECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
RDWNAGLIPVLFAHPASAGHGLNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGH
CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHCCCCHHCCCC
KRPVWIYHIIAEDTVDELVKERRDSKREVQDILLEAMKKRGLR
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKKFIPHEYQNQIILHEIDAPRSNVWAGMGMGKTVATLTSLEDLFMSGSETQPTLVLAP
CCCCCCCHHHHCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC
LRVARSTWPDEVDKWDHLRNIEMQPVVGTAQERLAALRNPNASVFTTNYDNLVWLIEALN
HHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEEHHC
GEWPFGTVIADESTRLKSFRLRKGGKRAAALAKVAHRSGRWVNLSGTPAPNGLQDLWGQA
CCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCE
WFLDKGQRLGRTFSAFTDRWFNRIPIGTTGFNKIEPRECAQQQMQDALRDVTISLNAADW
EEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCC
FDIDEPIHSVVRVGLSPKARSQYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIY
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEE
TDEAGNWTEIHDAKLQALESIITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQ
ECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
RDWNAGLIPVLFAHPASAGHGLNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGH
CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHCCCCHHCCCC
KRPVWIYHIIAEDTVDELVKERRDSKREVQDILLEAMKKRGLR
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA