| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yfhL [H]
Identifier: 170023440
GI number: 170023440
Start: 1329491
End: 1329676
Strand: Reverse
Name: yfhL [H]
Synonym: YPK_1194
Alternate gene names: 170023440
Gene position: 1329676-1329491 (Counterclockwise)
Preceding gene: 170023442
Following gene: 170023432
Centisome position: 28.35
GC content: 47.31
Gene sequence:
>186_bases ATGGGTGCAGAAATCTATCAAATTGATCCGATGCGCTGTACTGAGTGTGTAGGTCATTACGAAACGCCAACCTGTCAGCT GGTCTGCCCTATTGATAATACGATTTCTGCCGACCCTGCTTGGGTTGAGACTAACGAGCAGTTGTGGGATAAGTTTGTTC AGCTACACCATGCCGATCGTCTGTAA
Upstream 100 bases:
>100_bases AAGATTAAAAAGGTAAGTTACTGAAATGGCTTTATTGATTACTAAACGCTGTATCAACTGCGATATGTGCGAACCGGAAT GCCCGAATGAGGCAATCTCC
Downstream 100 bases:
>100_bases TACCGCTCGTCATACCTCCTCGCTCATATCAACAAGCCCAGTATGCAAAAAGGGATGGCATTTCCATACCCATCCCTTAA ATTTTCGGCTATCACGCTCA
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL
Sequences:
>Translated_61_residues MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL >Mature_60_residues GAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=61, Percent_Identity=72.1311475409836, Blast_Score=97, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7034; Mature: 6903
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADR CCCCEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCC L C >Mature Secondary Structure GAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADR CCCEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]