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The map label for this gene is mltD [H]

Identifier: 170023351

GI number: 170023351

Start: 1244446

End: 1245864

Strand: Reverse

Name: mltD [H]

Synonym: YPK_1105

Alternate gene names: 170023351

Gene position: 1245864-1244446 (Counterclockwise)

Preceding gene: 170023352

Following gene: 170023345

Centisome position: 26.57

GC content: 47.08

Gene sequence:

>1419_bases
ATGATTGCTCGTCTTTTAAGCAACCACATTGACACACACATGAAGACCAAAGCGATACTTCTCGCCTCAGTCTTGCTTGT
CGGGTGCCAGACGTCCAAGCAGGACGCGCAGGCTCCCGAACAGCATGCACAGAGTTTGTCTTCGGCAGGTGAAGCAGGAG
AGTACACAAATAGCACCCGAGAGGGTTCAGCGCGCTGGCTGGAAAGTGAAAGCAGCTACGCGCAGCAAGATTTGTGGAAC
TTCATCAAAGACGAGCTGAAGATGAAGGTTCCGGAGAATTCCCGGATCCGTGAACAAAAACAGAAATACTTAAAAAATAA
GAGCTATCTCCACGATGTAACATTACGGGCAGAGCCGTACATGTACCTGATAGTCGAGCAGATTAAGAAACGTAAGATGC
CGATGGAACTGGTACTGCTACCCATAGTGGAGAGCGCTTTTGACCCACACGCGACATCATCCGCCAATGCCGCAGGGCTA
TGGCAGATTGTGCCAAGTACGGGGCGAAATTATGGCTTGAAGCAAAATCAATGGTATGACGGTCGCAGAGATGTTGTTGC
CTCTACCAAAGCAGCGCTTGATATATTGGAACGCTTGAACAAAATGTTTAACGGTGACTGGTTATTGACAGTCGCAGCTT
ATAACAGCGGTGAAGGCCGAGTTATGCAAGCGATAAAAGCCAATAAGGCAAAGGGCAAACCGACCGATTTTTGGGCATTG
TCGCTTCCGCGTGAAACGTCAATTTATGTTCCAAAAATGCTGGCCTTGGGTGATTTACTCAAGAACAGCAAAAAGTACGG
TATAACCTTGCCTGAGACTGACAAAGACCGTGCGCTGGCTCGCGTTGATGTCGATCAACAAATAGAGCTAACTCAGGCAG
CTGAGATGGCGGGGATGTCACTGACAAAGCTGAAATCCTTTAATTCTGGCTACAAACGCAATGTAACGGCACCGGATGGA
CATGGTCCCCGTTATATTATGTTACCGAAAGCCCATGCTGAGCAGTTGAAAGACTCATTGGCAGATACTGATATTACTGC
TGTTCAACCTACAAAATTGGCAACGAACAGTACAAAATCAGCATCAAGTTCGCAGTATAAAGTTCGCCCAGGCGATACCT
TATCTACGATTGCCAAGCGGTTGAATATCAAGACCAGCGATTTGCAGAGTTGGAACAACTTACGTGCCAAGAGCACCTTA
AAAGTTGGGCAAACCCTGCAACTGGCAAGCAATACAACCAGCAAAAGTATCACCTATCAAGTTCGTAAAGGTGATTCCTT
TGCCAGTATTGCCAAGCGTCACGGTGTAAATACCGACGATGTGATGCGATGGAATTCGGTAGTCAGCAAAGCTAACAATT
TACAACCAGGCTTGAAATTGACGTTATTCGTTAACGACAAATCAACCCCGGAGGCGTAG

Upstream 100 bases:

>100_bases
TAACTTCGCCTCCAGACTCACTTGTCTCTGTTTTCTGCGAATTACGCTCCCGAAAAGACAGCTTTTGAGCTTTTAGTTGT
GTTTTTTATCGAAGCAAAGT

Downstream 100 bases:

>100_bases
AGCCAGAATCACTGTCAAAAAGCACCTTTCGAGGTGCTTTTTTTATGGTTGGAATTCGACAATGAGTGGGTTGTGATCGG
AGGCTCTGGTCACTAAAACT

Product: membrane-bound lytic murein transglycosylase D

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: Murein hydrolase D; Regulatory protein dniR [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTREGSARWLESESSYAQQDLWN
FIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPYMYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGL
WQIVPSTGRNYGLKQNQWYDGRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMSLTKLKSFNSGYKRNVTAPDG
HGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKSASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTL
KVGQTLQLASNTTSKSITYQVRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA

Sequences:

>Translated_472_residues
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTREGSARWLESESSYAQQDLWN
FIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPYMYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGL
WQIVPSTGRNYGLKQNQWYDGRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMSLTKLKSFNSGYKRNVTAPDG
HGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKSASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTL
KVGQTLQLASNTTSKSITYQVRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
>Mature_472_residues
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTREGSARWLESESSYAQQDLWN
FIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPYMYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGL
WQIVPSTGRNYGLKQNQWYDGRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMSLTKLKSFNSGYKRNVTAPDG
HGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKSASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTL
KVGQTLQLASNTTSKSITYQVRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786405, Length=469, Percent_Identity=63.3262260127932, Blast_Score=583, Evalue=1e-168,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR010511
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01476 LysM; PF06474 MLTD_N; PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 52494; Mature: 52494

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCC
EGSARWLESESSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPY
CCCHHHHHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCHHEEEEECCCCH
MYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQWYD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEE
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMS
ECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCH
LTKLKSFNSGYKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKS
HHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
ASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSITYQ
CCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCEEEECCCCCCCEEEEE
VRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
EECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCC
EGSARWLESESSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPY
CCCHHHHHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCHHEEEEECCCCH
MYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQWYD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEE
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMS
ECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCH
LTKLKSFNSGYKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKS
HHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
ASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSITYQ
CCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCEEEECCCCCCCEEEEE
VRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
EECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]