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The map label for this gene is yrbH [C]

Identifier: 170022687

GI number: 170022687

Start: 479381

End: 479986

Strand: Direct

Name: yrbH [C]

Synonym: YPK_0436

Alternate gene names: 170022687

Gene position: 479381-479986 (Clockwise)

Preceding gene: 170022686

Following gene: 170022689

Centisome position: 10.22

GC content: 50.66

Gene sequence:

>606_bases
ATGAGCCAGAATAAGGAGTGGCTGGCGGCCAGTGATGCCTGGATGATCTACAGCCGCGAACTGGCGGCATTAAAAGAGAA
TGTCGATCAACAGGTGTGGTTGCAGGTACTGGATGCCTTGGCTGAATGCCGTGGAAAAATTGCGGTGACGGGGGTGGGGA
CATCGGGTATTGCGGCCCGTAAAGTGGCGCATATGCTAGCTTGTGTTGAGCAACCGGCGATTTACCTGAATGCAACTGAT
GCGGCACACGGTGATCTGGGGTTTCTCGGCGCGCAGGACATCATTATTTTGATTTCCCGTGGCGGTAATTCTGATGAGTT
AACCCGTTTGCTGCCCACCTTGCAACGTAAGCAAGTGAAGATTATCAGCGTGACAGAAAATGAACAGTCTGCAATTGCGC
AGGTCTCCGCGTTGGTGCTGAAGACACATGTAAAGCAGGAGATCGATCCGCTGAATATGTTAGCGACAACATCGATTGTT
TTAGTACTGGCGCTGTTTGATGCTATCTGTGCCTGTCTAATGGCGCGTACTGGTTTTAGTAAAGAGACTTTATTGGCGGT
TCATCCCGGTGGAGATGTCGGGATGGCGTTACGTAAGCAGCAATAA

Upstream 100 bases:

>100_bases
AAACCAATAAAATCAAAGCCTATTACGATCGTAAGTACCGGGTATTCCATCAGATGTATCACGACCATATGCGCTATCAG
GCACTGATGCAGGAGGGCGC

Downstream 100 bases:

>100_bases
TCAATACTCATGATAGCCCGCGTGAAAGAGAAACACCGCAACGGTATGGCCGCGCGGTGTTTTTTTATCAAGTCAGATCT
TTTATTAGCTAAGTAAACTT

Product: sugar isomerase (SIS)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATD
AAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIV
LVLALFDAICACLMARTGFSKETLLAVHPGGDVGMALRKQQ

Sequences:

>Translated_201_residues
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATD
AAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIV
LVLALFDAICACLMARTGFSKETLLAVHPGGDVGMALRKQQ
>Mature_200_residues
SQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATDA
AHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVL
VLALFDAICACLMARTGFSKETLLAVHPGGDVGMALRKQQ

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=189, Percent_Identity=34.3915343915344, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI87082151, Length=189, Percent_Identity=29.6296296296296, Blast_Score=106, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 21648; Mature: 21517

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAAR
CCCCCCEEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KVAHMLACVEQPAIYLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVK
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEE
IISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFS
EEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KETLLAVHPGGDVGMALRKQQ
CCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAAR
CCCCCEEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KVAHMLACVEQPAIYLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVK
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEE
IISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFS
EEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KETLLAVHPGGDVGMALRKQQ
CCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]