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The map label for this gene is ssuC [H]

Identifier: 170022674

GI number: 170022674

Start: 462214

End: 463008

Strand: Direct

Name: ssuC [H]

Synonym: YPK_0423

Alternate gene names: 170022674

Gene position: 462214-463008 (Clockwise)

Preceding gene: 170022673

Following gene: 170022675

Centisome position: 9.86

GC content: 53.33

Gene sequence:

>795_bases
ATGACAATCAGTGCACAACGAATTCTGCATCGGCTGGCCCCTTGGATTTTGCCCGTGGCGTTGGTGGTTGGCTGGCAAGT
CGCGGTTGAGGCGGGTTGGTTATCCAACCGCATATTACCTGCGCCAAGTGCCGTAGTGACCGCATTTTGGGCACTGACCA
AAAGTGGTGAGCTGTGGCAACACCTGACTATCAGCAGTTGGCGTGCCCTGATTGGTTTTAGCATCGGTGGCAGCATCGGA
TTAGTGTTGGGGGTCATCACGGGTTTGTCTCGCTGGGGAGAGCGGTTACTCAATAGCTCGGTCCAGATGATCCGGAATGT
CCCGCATCTGGCACTGATCCCGCTGGTGATCCTGTGGTTCGGCATTGACGAATCCGCCAAAATTTTTCTGGTGGCACTCG
GGACGTTGTTCCCTATTTATCTGAACACCTATCACGGTATTAAGAATATTGACAGTGGCCTACTGGAAATGGCGCGCAGT
TATGGGCTGAGCGGTTTTCGATTATTGACGCAAGTGGTGCTGCCAGGCGCGTTGCCATCGATCATGGTCGGTGTGCGTTT
TGCGCTCGGATTTATGTGGCTGACGCTTATCGTGGCTGAAACCATTTCCGCCAATTCGGGTATTGGTTATCTGGCAATGA
ACGCCCGTGAATTTCTCCAGACCGATGTGGTGGTGGTGGCCATTGTTCTGTATGCCTTACTCGGCAAACTGGCCGATGGC
AGTGCACAACTGCTCGAACGAGTCTGGTTGCGTTGGCATCCGGCCTATCAACAGAAATCAGGAGAAGCGCAATGA

Upstream 100 bases:

>100_bases
CCGAGCTACCGACGCAGCGGCCTGCAACCCAACCGCAAGGTGAAGTAGTCGCCAATATTTATGTGCCACAAAAAGTCTCG
CAAAGCTGAGGAGAAACATG

Downstream 100 bases:

>100_bases
CCATACTGACTCATATCCCGCAAGGGACGCCAATAACGTTGGAGTCGATCGGCAAACGTTATGGTAATCGTACTGTTTTA
GATAATCTGCAACTGCGTAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIG
LVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARS
YGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADG
SAQLLERVWLRWHPAYQQKSGEAQ

Sequences:

>Translated_264_residues
MTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIG
LVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARS
YGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADG
SAQLLERVWLRWHPAYQQKSGEAQ
>Mature_263_residues
TISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGL
VLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSY
GLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGS
AQLLERVWLRWHPAYQQKSGEAQ

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=261, Percent_Identity=79.3103448275862, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1786564, Length=246, Percent_Identity=34.9593495934959, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789033, Length=184, Percent_Identity=28.804347826087, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28881; Mature: 28749

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH
HLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
IMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAQLLERVWLRWHPAYQQKSGEAQ
HHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure 
TISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH
HLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
IMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAQLLERVWLRWHPAYQQKSGEAQ
HHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]