Click here to switch to the map view.

The map label for this gene is 170022644

Identifier: 170022644

GI number: 170022644

Start: 425107

End: 426423

Strand: Direct

Name: 170022644

Synonym: YPK_0391

Alternate gene names: NA

Gene position: 425107-426423 (Clockwise)

Preceding gene: 170022643

Following gene: 170022645

Centisome position: 9.07

GC content: 51.33

Gene sequence:

>1317_bases
ATGGATAAAAAACAACCAACGCTGTCATTGCGGGTCGTCAACAGCGATAAATTAGAGAGTGGCAAACAAGCCAGCAGCCT
GTTTCATGCGCAAGGGGGCAGTGTCGGCAGTGACGGTAGCCATCATTGGTCGATTCAGGACCAAGGCGGCAATATCAGCC
CGTCACAGTTTGCTATCGAATGGCGTGATGGCTCTTTCTGCCTGCGGTTGCTGAATGGCTCTCTGAACATTAATCATTCG
ATGCTAACACCCAATTCGGGTTTCGTTCGCCTACAGCAAGGGGATGAAATGACGTTGGGTAATCTGGTGATCAAAAGCCA
TATCAGCCGTTCTGCTGCCGATATGATCGATCCACTGATGGTGTCACCAGAGTCACTGGTATCGAGTTACAGCAACCCGA
TGGATGCCATGATGGAGGGGGAGCCGTTGGCCTCGCCTCATCATCAGCAAGACAGCCGGTTAGCCGCGACGGTTAGCCAT
AATTTCAGCCATGATCCATTACGGGTATTGGAAACGGAAAGCCTGACTACGCAAGGCCATGACGCCGTGATATCTGATGC
TGATCACTCTCTACAGCAGGACCGATACCGTAACCCACTTTTCTCTTCCCCGCTCTCTGATACCCCCAAGGACAGTGCTA
TGGATCAGGCGTTTATCGATCTCCCGCAGATCAGTACCTTTCTTAACGGTAAACAAGCGGGGGGCAAACCAGAAGGACTC
AATAACCAAATGGAACAACATCACGTTGCCATTACGCCGCTGATGCGTGGTTTTGACGCTCAACTCCCGATCCGCAACAG
CCAGGAAGCTCACGATTTCCTTGAAGAGGCGGGTAAAACACTCAAAGCGACAATCGAAGGTCTGCTCGCCTTACAACGCA
GCCAACATGGCTTGCGTGATAAGCACTTACGGCCGATTGAAGATAATCCATTGCGTCTGAATATGGATTACGACACCACC
CTCAACTTGATGTTTGCCGATCAAAAAAGCCCGGTTCATCTTTCAGCGCCCGCCGCCGTGGCCGAAAGCCTGGATAACCT
GCGTTTGCATCATCAGGCCAATCAACAGGCGATTACGCAAGCCTTGAACACCATGTTGGAAGCCTTCTCCCCTGAGCGTT
TACTGACGCGTTTTACCCATTATTTGCGCAGTAATGAGCGGCAAGAGCAGGACTCCGCCTGGGCGTGGGATATGTACAAA
AACTACTATAACGAGCTGGCCTCCAGCCGCCAGCAAGGTTTTGAAAAACTGTTTGGCGAAGTGTATGAGCAAGCCTATGA
CCGGGCCTTACGTCAAGGCATGAAGGATAGCGAGTAA

Upstream 100 bases:

>100_bases
GACGCGATGGAATAACGGTCGGCATGATGAAATAACGACCCGCGTTGTGAAATAGCGATCAGCGTTATGAAATAAGAATC
AGTATTCAGGAAGAGACACC

Downstream 100 bases:

>100_bases
TGAACAACGCCAGAGGCTATCTCCTGACGTGGGCATTATGTGTAGTGTTCCTATTGTCTGGGTGCAGCGGTGCATGGGAA
GCCACTAAAAAGGTCGGCAA

Product: FHA domain-containing protein

Products: NA

Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain Containing Protein

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MDKKQPTLSLRVVNSDKLESGKQASSLFHAQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRLLNGSLNINHS
MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH
NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL
NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT
LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK
NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE

Sequences:

>Translated_438_residues
MDKKQPTLSLRVVNSDKLESGKQASSLFHAQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRLLNGSLNINHS
MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH
NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL
NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT
LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK
NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE
>Mature_438_residues
MDKKQPTLSLRVVNSDKLESGKQASSLFHAQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRLLNGSLNINHS
MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH
NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL
NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT
LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK
NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE

Specific function: Unknown

COG id: COG3456

COG function: function code T; Uncharacterized conserved protein, contains FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48999; Mature: 48999

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKQPTLSLRVVNSDKLESGKQASSLFHAQGGSVGSDGSHHWSIQDQGGNISPSQFAIE
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
WRDGSFCLRLLNGSLNINHSMLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLM
ECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSHNFSHDPLRVLETESLTTQGH
CCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHCCCCCCCCHHHEECCCCCCCCC
DAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL
CCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC
NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRD
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KHLRPIEDNPLRLNMDYDTTLNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQ
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYKNYYNELASSRQQGFEKLFGE
HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYEQAYDRALRQGMKDSE
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKKQPTLSLRVVNSDKLESGKQASSLFHAQGGSVGSDGSHHWSIQDQGGNISPSQFAIE
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
WRDGSFCLRLLNGSLNINHSMLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLM
ECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSHNFSHDPLRVLETESLTTQGH
CCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHCCCCCCCCHHHEECCCCCCCCC
DAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL
CCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC
NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRD
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KHLRPIEDNPLRLNMDYDTTLNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQ
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYKNYYNELASSRQQGFEKLFGE
HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYEQAYDRALRQGMKDSE
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA