Click here to switch to the map view.

The map label for this gene is bfd [H]

Identifier: 170022541

GI number: 170022541

Start: 318185

End: 318379

Strand: Direct

Name: bfd [H]

Synonym: YPK_0280

Alternate gene names: 170022541

Gene position: 318185-318379 (Clockwise)

Preceding gene: 170022540

Following gene: 170022542

Centisome position: 6.79

GC content: 46.15

Gene sequence:

>195_bases
ATGTACGTTTGTCTATGTAATGCGGTTTCTGACAAAGTCATTCGCAAAGCTGTGCGCCAGCATCAGCCCCATACAGTTAA
GCAACTGCGACAGCTTGTGCCGATTGGTAGTGACTGTGGGAAGTGCATCCGACAAGCCAGAGAGATCTTGATTGAGGAAC
TCGCTAATATTCCAGAAATGAATGATGTTGCCTAA

Upstream 100 bases:

>100_bases
CTATGCCGGAGGATATTTATTGATAAAGTGAATAATCTTAATTGAAATAAAACTCATTCTTATTTACACTCAAAAGACTG
GTTAAGAAATGAGTCTTTTT

Downstream 100 bases:

>100_bases
TAGTTAGCTCGGAGAAGTTTTCCGCATACTTTGCCATCTGGTACTACACTGTTAGTACTGGAAGCGGAGGGTATAACTAT
GAAAGGTGATAAAAAGATAA

Product: bacterioferritin-associated ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA

Sequences:

>Translated_64_residues
MYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA
>Mature_64_residues
MYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA

Specific function: Seems to associate with BFR; could be a general redox and/or regulatory component participating in the iron storage mobilization functions of BFR. Could participate in the release or the delivery of iron from/to bacterioferritin (or other iron complexes)

COG id: COG2906

COG function: function code P; Bacterioferritin-associated ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789735, Length=64, Percent_Identity=54.6875, Blast_Score=89, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419 [H]

Pfam domain/function: PF04324 Fer2_BFD [H]

EC number: NA

Molecular weight: Translated: 7244; Mature: 7244

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEM
CEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NDVA
CCCC
>Mature Secondary Structure
MYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEM
CEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NDVA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA