| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is pckG [H]
Identifier: 169629647
GI number: 169629647
Start: 2605977
End: 2607842
Strand: Reverse
Name: pckG [H]
Synonym: MAB_2561c
Alternate gene names: 169629647
Gene position: 2607842-2605977 (Counterclockwise)
Preceding gene: 169629648
Following gene: 169629645
Centisome position: 51.47
GC content: 63.24
Gene sequence:
>1866_bases GTGGCAAGTTCGGTGGAAATGACCGGTGCGGCACAGGCAGTGCCAGGATTGGCGCCCGCGCCAACCACCCACGCCGGGGT GTTGTTGTGGGTGGCCGAGATGGCCGAACTATTGGAACCGGACAAGGTGGTGTGGTGCGACGGATCGCGCGCTGAATGGG ATCGGTTGACCAAGCAGCTCGTCGCCAAGGGCACCTTTGTGCCGCTGACAGGCAAGCCGAATTCGTTTTGGGCCGTTTCT GACCCGGCGGATGTGGCACGGGTAGAAGACCGCACGTTCATCTGCTCCGACGACGCGTCCGATGCTGGGCCGACCAACAA CTGGATGGACCCGGTCGACATGACCACGATCATGACCGAGGAATATCGCGGTGCGATGGCAGGCCGCACGATGTACGTGA TCGCGTTCTGCATGGGCCCGCTGGGTTCAGATGACCCGAAATTCGGGGTACAGATTACTGATTCGGAGTACGTGGCCGTC TCGATGCAGATCATGACGCGCTCCGGCTCGCACGTCTGGGACCGTCTCGGGCTGCGCGGCCGGTTCGTCAAATGCGTGCA CTCGGTGGGTGCTCCGCTTGCGCCGGGACAATCTGATGTGCCCTGGCCGTGTGATGCAACCAAGTACATTTCGCATTTCC CCTCCACCCGCACCATCTGGAGTTATGGGTCCGGATACGGCGGGAATGCCTTGTTGGGCAAGAAGTGTTTCGCCCTGCGC ATCGCATCGGTGATGGCGCGCGATGAGGGCTGGCTCGCCGAGCACATGCTGATCCTCAAGCTCACCTCCCCCGAGGGTGC CGCGAAGTACGTGGCCGCAGCATTTCCGTCCTCGTGCGGCAAGACCAACATGGCGATGCTGCAACCCGCGCTACCGGGCT GGACGGCCGAAACGATCGGCGACGACATCGCCTGGATACGTTTCGGGGCCGATGGGCGCCTGTACGCGGTCAACCCAGAA GCCGGGTTCTTCGGGGTGGCGCCGGGCACCGGAAAGAGCACCAACCCGAACGCCATGGACACCATCGAGCTCGGCAACTC GATCTTCACCAACACCGCGCTGACCGATGATGGGGACGTGTGGTGGGAAGGAATGACCAAGACACCGCCGGAACATCTGA TCGACTGGCAAGGCCGGCAGTGGACTCCGGAGTCGACTGAGCCTGCGGCACATCCGAATTCACGGTACTGCACACCCATT GCGCAGTGCCCGACCGTCGCACCCGAGTGGGATGACCCCACCGGGGTACCCATCTCGGCGATCTTCTTCGGCGGCCGCCG CGCCTCCACGGTGCCGCTGATCACCGAAGCCTTGAGCTGGCGTCACGGAGTGTTCTTGGCTTCCACCTTGTCCTCGGAAA CCACCGCGGCCGCCGCGGGCGAAGTCGGGGTACTGCGCCGCGATCCCATGGCGATGCGCCCCTTCCTCGGATACCACGTG GGTGACTACTTTCAGCACTGGCTCAATATCGGTACCCGCTCCGATCCAGACCTACTTCCGAAGATCTTCTACGTCAACTG GTTTCGCCGCGATTCCGGCGGCAAGTTCTTGTGGCCCGGGTTCGGGGAGAACGCGCGCGTACTCAAATGGGCGCTTGATC GCCTCGATGCCGCCACGGACGCGGTCGCTACCCCGATCGGCTTTGTGCCCACCTGCGACGCCCTGGACCGGACCGGCCTA GATATCAGTGATCAGGATCTACACGCGGCGCTGGCCGTCAACATCGACGAATGGGTCACCGAAGCTGAATCGATCGACTA CTGGTATGCCAGCATCGGCGGCAATCGGCTACCCGACGAACTGCGGGTCGAACTCGGTGCGCTACGAATGCGGCTGGCCG AGGCACGGCAGACGAGCCGGCTATAG
Upstream 100 bases:
>100_bases GTGTTGGGGCATCTCCGGCTAGCGCCCTCTAATTGCTTGTTTTCTTAATTAGCACGCTTTATTGGTAGTCGAGGTCCGTG ATGAACGGTGAGGAGCAGTT
Downstream 100 bases:
>100_bases GCCGGAGGGCACGACCTTGCCGTTGACCGTGACCGCTACCTCGCCGCTCTTCGCGTTGTACTCGATCTTGCCGTGCTCAA AGGTCGACACGAGCTGATCA
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MASSVEMTGAAQAVPGLAPAPTTHAGVLLWVAEMAELLEPDKVVWCDGSRAEWDRLTKQLVAKGTFVPLTGKPNSFWAVS DPADVARVEDRTFICSDDASDAGPTNNWMDPVDMTTIMTEEYRGAMAGRTMYVIAFCMGPLGSDDPKFGVQITDSEYVAV SMQIMTRSGSHVWDRLGLRGRFVKCVHSVGAPLAPGQSDVPWPCDATKYISHFPSTRTIWSYGSGYGGNALLGKKCFALR IASVMARDEGWLAEHMLILKLTSPEGAAKYVAAAFPSSCGKTNMAMLQPALPGWTAETIGDDIAWIRFGADGRLYAVNPE AGFFGVAPGTGKSTNPNAMDTIELGNSIFTNTALTDDGDVWWEGMTKTPPEHLIDWQGRQWTPESTEPAAHPNSRYCTPI AQCPTVAPEWDDPTGVPISAIFFGGRRASTVPLITEALSWRHGVFLASTLSSETTAAAAGEVGVLRRDPMAMRPFLGYHV GDYFQHWLNIGTRSDPDLLPKIFYVNWFRRDSGGKFLWPGFGENARVLKWALDRLDAATDAVATPIGFVPTCDALDRTGL DISDQDLHAALAVNIDEWVTEAESIDYWYASIGGNRLPDELRVELGALRMRLAEARQTSRL
Sequences:
>Translated_621_residues MASSVEMTGAAQAVPGLAPAPTTHAGVLLWVAEMAELLEPDKVVWCDGSRAEWDRLTKQLVAKGTFVPLTGKPNSFWAVS DPADVARVEDRTFICSDDASDAGPTNNWMDPVDMTTIMTEEYRGAMAGRTMYVIAFCMGPLGSDDPKFGVQITDSEYVAV SMQIMTRSGSHVWDRLGLRGRFVKCVHSVGAPLAPGQSDVPWPCDATKYISHFPSTRTIWSYGSGYGGNALLGKKCFALR IASVMARDEGWLAEHMLILKLTSPEGAAKYVAAAFPSSCGKTNMAMLQPALPGWTAETIGDDIAWIRFGADGRLYAVNPE AGFFGVAPGTGKSTNPNAMDTIELGNSIFTNTALTDDGDVWWEGMTKTPPEHLIDWQGRQWTPESTEPAAHPNSRYCTPI AQCPTVAPEWDDPTGVPISAIFFGGRRASTVPLITEALSWRHGVFLASTLSSETTAAAAGEVGVLRRDPMAMRPFLGYHV GDYFQHWLNIGTRSDPDLLPKIFYVNWFRRDSGGKFLWPGFGENARVLKWALDRLDAATDAVATPIGFVPTCDALDRTGL DISDQDLHAALAVNIDEWVTEAESIDYWYASIGGNRLPDELRVELGALRMRLAEARQTSRL >Mature_620_residues ASSVEMTGAAQAVPGLAPAPTTHAGVLLWVAEMAELLEPDKVVWCDGSRAEWDRLTKQLVAKGTFVPLTGKPNSFWAVSD PADVARVEDRTFICSDDASDAGPTNNWMDPVDMTTIMTEEYRGAMAGRTMYVIAFCMGPLGSDDPKFGVQITDSEYVAVS MQIMTRSGSHVWDRLGLRGRFVKCVHSVGAPLAPGQSDVPWPCDATKYISHFPSTRTIWSYGSGYGGNALLGKKCFALRI ASVMARDEGWLAEHMLILKLTSPEGAAKYVAAAFPSSCGKTNMAMLQPALPGWTAETIGDDIAWIRFGADGRLYAVNPEA GFFGVAPGTGKSTNPNAMDTIELGNSIFTNTALTDDGDVWWEGMTKTPPEHLIDWQGRQWTPESTEPAAHPNSRYCTPIA QCPTVAPEWDDPTGVPISAIFFGGRRASTVPLITEALSWRHGVFLASTLSSETTAAAAGEVGVLRRDPMAMRPFLGYHVG DYFQHWLNIGTRSDPDLLPKIFYVNWFRRDSGGKFLWPGFGENARVLKWALDRLDAATDAVATPIGFVPTCDALDRTGLD ISDQDLHAALAVNIDEWVTEAESIDYWYASIGGNRLPDELRVELGALRMRLAEARQTSRL
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=602, Percent_Identity=51.4950166112957, Blast_Score=594, Evalue=1e-170, Organism=Homo sapiens, GI187281517, Length=593, Percent_Identity=49.5784148397976, Blast_Score=591, Evalue=1e-169, Organism=Homo sapiens, GI66346723, Length=371, Percent_Identity=53.099730458221, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71989645, Length=603, Percent_Identity=48.7562189054726, Blast_Score=578, Evalue=1e-165, Organism=Caenorhabditis elegans, GI71989658, Length=603, Percent_Identity=48.7562189054726, Blast_Score=577, Evalue=1e-165, Organism=Caenorhabditis elegans, GI71989653, Length=590, Percent_Identity=48.6440677966102, Blast_Score=565, Evalue=1e-161, Organism=Caenorhabditis elegans, GI17555492, Length=612, Percent_Identity=46.4052287581699, Blast_Score=553, Evalue=1e-157, Organism=Caenorhabditis elegans, GI32564411, Length=550, Percent_Identity=48.3636363636364, Blast_Score=536, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32564407, Length=523, Percent_Identity=48.3747609942639, Blast_Score=498, Evalue=1e-141, Organism=Caenorhabditis elegans, GI71989649, Length=504, Percent_Identity=50.1984126984127, Blast_Score=497, Evalue=1e-141, Organism=Caenorhabditis elegans, GI32564409, Length=369, Percent_Identity=47.1544715447154, Blast_Score=344, Evalue=7e-95, Organism=Caenorhabditis elegans, GI17540956, Length=524, Percent_Identity=25.763358778626, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24655085, Length=600, Percent_Identity=50.1666666666667, Blast_Score=593, Evalue=1e-170, Organism=Drosophila melanogaster, GI24655082, Length=601, Percent_Identity=50.0831946755408, Blast_Score=593, Evalue=1e-169, Organism=Drosophila melanogaster, GI161077226, Length=568, Percent_Identity=51.056338028169, Blast_Score=572, Evalue=1e-163, Organism=Drosophila melanogaster, GI24655088, Length=503, Percent_Identity=51.4910536779324, Blast_Score=523, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 67643; Mature: 67512
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSVEMTGAAQAVPGLAPAPTTHAGVLLWVAEMAELLEPDKVVWCDGSRAEWDRLTKQL CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH VAKGTFVPLTGKPNSFWAVSDPADVARVEDRTFICSDDASDAGPTNNWMDPVDMTTIMTE HHCCCEEEECCCCCCEEEECCCHHHHEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH EYRGAMAGRTMYVIAFCMGPLGSDDPKFGVQITDSEYVAVSMQIMTRSGSHVWDRLGLRG HHHHHHCCCHHEEEEEHHCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCHHHHHHCCCH RFVKCVHSVGAPLAPGQSDVPWPCDATKYISHFPSTRTIWSYGSGYGGNALLGKKCFALR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH IASVMARDEGWLAEHMLILKLTSPEGAAKYVAAAFPSSCGKTNMAMLQPALPGWTAETIG HHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHCC DDIAWIRFGADGRLYAVNPEAGFFGVAPGTGKSTNPNAMDTIELGNSIFTNTALTDDGDV CCEEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCE WWEGMTKTPPEHLIDWQGRQWTPESTEPAAHPNSRYCTPIAQCPTVAPEWDDPTGVPISA EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEE IFFGGRRASTVPLITEALSWRHGVFLASTLSSETTAAAAGEVGVLRRDPMAMRPFLGYHV EEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCEEECCCCHHHHHHHHHH GDYFQHWLNIGTRSDPDLLPKIFYVNWFRRDSGGKFLWPGFGENARVLKWALDRLDAATD HHHHHHHHHCCCCCCHHHHHHEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHH AVATPIGFVPTCDALDRTGLDISDQDLHAALAVNIDEWVTEAESIDYWYASIGGNRLPDE HHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCHH LRVELGALRMRLAEARQTSRL HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASSVEMTGAAQAVPGLAPAPTTHAGVLLWVAEMAELLEPDKVVWCDGSRAEWDRLTKQL CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH VAKGTFVPLTGKPNSFWAVSDPADVARVEDRTFICSDDASDAGPTNNWMDPVDMTTIMTE HHCCCEEEECCCCCCEEEECCCHHHHEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH EYRGAMAGRTMYVIAFCMGPLGSDDPKFGVQITDSEYVAVSMQIMTRSGSHVWDRLGLRG HHHHHHCCCHHEEEEEHHCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCHHHHHHCCCH RFVKCVHSVGAPLAPGQSDVPWPCDATKYISHFPSTRTIWSYGSGYGGNALLGKKCFALR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH IASVMARDEGWLAEHMLILKLTSPEGAAKYVAAAFPSSCGKTNMAMLQPALPGWTAETIG HHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHCC DDIAWIRFGADGRLYAVNPEAGFFGVAPGTGKSTNPNAMDTIELGNSIFTNTALTDDGDV CCEEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCE WWEGMTKTPPEHLIDWQGRQWTPESTEPAAHPNSRYCTPIAQCPTVAPEWDDPTGVPISA EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEE IFFGGRRASTVPLITEALSWRHGVFLASTLSSETTAAAAGEVGVLRRDPMAMRPFLGYHV EEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCEEECCCCHHHHHHHHHH GDYFQHWLNIGTRSDPDLLPKIFYVNWFRRDSGGKFLWPGFGENARVLKWALDRLDAATD HHHHHHHHHCCCCCCHHHHHHEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHH AVATPIGFVPTCDALDRTGLDISDQDLHAALAVNIDEWVTEAESIDYWYASIGGNRLPDE HHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCHH LRVELGALRMRLAEARQTSRL HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA