| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is katE [H]
Identifier: 169629616
GI number: 169629616
Start: 2577471
End: 2579579
Strand: Reverse
Name: katE [H]
Synonym: MAB_2530c
Alternate gene names: 169629616
Gene position: 2579579-2577471 (Counterclockwise)
Preceding gene: 169629617
Following gene: 169629615
Centisome position: 50.91
GC content: 61.45
Gene sequence:
>2109_bases GTGGACCGCACGTCGAATCCCAAACAAGAGCAACTCGACACGTCCCGGGTGGACCGAGCCTCTGGTTATCTCACTACCCA GCAAGGCGTTCGCGTCGACCACACCGATGACGCGCTCACCGCCGGTGTCAGGGGCCCCACGCTGCTGGAGGATTTTCACG CCCGCGAGATAGTCACGCATTTTGACCACGAGCGCATTCCAGAGCGTGTGGTTCATGCGCGCGGCGCGGGCGCATACGGC TACTTCGAGCCGTACGACGCGTGGCTATCGGACTTCACAGCCGCGAAATTTCTCACCACACCCGGCCTGCGCACACCGGT GTTCGTTCGTTTCTCTACCGTTGCGGGGTCCCGCGGCTCGGCAGACACCGTGCGCGACGTACGCGGATTTGCCACGAAAT TCTATACACAGCAAGGCAATTACGATCTGGTCGGCAACAATTTCCCGGTATTCTTTATCCAGGACGGCATCAAATTTCCG GACTTCGTGCACGCGGTGAAGCCTGAGCCCGACAACGAGATCCCGCAGGCCGCCTCGGCGCATGACACCTTGTGGGACTT CGTTGCCGAGCAGCCCGAGACGCTACACGCGATCATGTGGCTCATGTCCGATAGGGCTCTGCCCCGCAGCTACCGCATGA TGCAAGGGTTCGGCGTACACACCTTCCGGTTGGTCAACGACGCCGGCGAGGGCGTTTTTGTGAAGTTCCACTGGAAGCCG CTGCTGGGCGTGCACTCACTGCTGTGGGACGAATGTCAGCAGATCGCCGGCAAGGACCCCGATTTCAACCGGCGCGATCT CTGGGACGCGATTGAGTCCGGCCAGTTTCCGGAATGGGAACTCGGAGTGCAGCTGGTGCCGGAATCCGACGAGTTCAAAT TCCCCTTCGACCTTCTTGATTCAACGAAAATCATTCCGGAAGAACAGGTTCCGGTGCAGCCGGTCGGACGCATGGTGCTG GATCGGAACCCCGACAACTTCTTTGCCGAGACAGAACAGGTCGCATTCCACACGGCCAACGTGGTGCCGGGAATCGACTT CACCAACGACCCGCTGCTTCAGTTTCGTAACTTCTCCTACCTGGATACACAACTGATCCGCCTGGGCGGTCCGAACTTCG CACAACTGCCCATCAACAGACCGATCGCCGAGGTACACAACAACCAGCGAGACGGCTTCGCGCAGCATGACATCCCACAA GGCAAGTCCAGCTATTTCAAGAACACCCTCGGCGGCGGCTGTCCGGCCCTGGCACATGAAGATGTCTTCCGCCACTACAC CCAACGAGTGGACGGACATAAGATCCGCCAGCGCGCCGAGAGCTTCAAGGATTTCTACAGCCAGCCGCGGATGTTCTGGA ACAGTATGTCCGCCGTCGAGGCGCAGCACATCGTTTCGGCATTCTCGTTCGAACTGGGCAAGGTGAGTGCCGAGGCCGGG ATTCGCGAACGTGTTGTCGCTCAACTCAACCTGGTGGAACACGATCTTGCTTCTCAAGTCGCCTTGCAGCTGGGCTTACC CGCCCCAGCGCCGCAATCGGCCGACGAGGCTCTTCCACCGTCCCCGGCGCTGTCCCAGCTTTCCACCACCCGAGACAGCA TCGCCACCCGACGGATCGCGGTGCTCGCGGCCGACGGCGTCGATATTCACGGCGTGGAGTTGCTTCGTGCGGCGCTGGAA GAGAGCGACGCGATTGTCGAGATACTCGCACCGACTGGCGGCGGAACGCTCACCGGCGAATCCGGCGGCGAACTCCGCGT CGACCGCGCGATGACCACGATGGCCTCGGTGTTATACGACGCCGTAGTCGTACCCTCCGGAGCCGAATCCGCCTGGCGGC TGGCGCGCAACGGCTTCGCCGTGCATTTCGTTTCCGAGGCCTACAAACATCTCAAGCCCGTCGCGGCCTACGGTTCCGGA CTCGATCTGCTCCGGGCAGCCTCTGTGGTCGAAACACTTGCCACCACCACGGAGATTGTGGTTGACGACGGCGTGGTGAC GACCACCGCGGAGGCCAATGCATTGCCGGCCGAATTCGTGGCCGCGTTTGTCACAGCGATCAGCCGGCATCGCGCCTGGG AACGCGAGACCGAGATGGTGCCCGCATAG
Upstream 100 bases:
>100_bases TTGTAAAACAACAATTTCATGGCGGGCCCCGCCCGATGTTTGTCGTTCGGCTACCGGGGTACCCGGCGGCAGTCTTTCCC GCGCCGCTAAGGAGTACATC
Downstream 100 bases:
>100_bases TTTGGTGCGTCGCTGGGCGGGTAAGTAGGTCATCATGTCTGTCGGAAAATACGAGGATGTCGGCGATGACGAGGCGGGAC CCGGCGACACATTGAACGTC
Product: catalase CatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MDRTSNPKQEQLDTSRVDRASGYLTTQQGVRVDHTDDALTAGVRGPTLLEDFHAREIVTHFDHERIPERVVHARGAGAYG YFEPYDAWLSDFTAAKFLTTPGLRTPVFVRFSTVAGSRGSADTVRDVRGFATKFYTQQGNYDLVGNNFPVFFIQDGIKFP DFVHAVKPEPDNEIPQAASAHDTLWDFVAEQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNDAGEGVFVKFHWKP LLGVHSLLWDECQQIAGKDPDFNRRDLWDAIESGQFPEWELGVQLVPESDEFKFPFDLLDSTKIIPEEQVPVQPVGRMVL DRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSYLDTQLIRLGGPNFAQLPINRPIAEVHNNQRDGFAQHDIPQ GKSSYFKNTLGGGCPALAHEDVFRHYTQRVDGHKIRQRAESFKDFYSQPRMFWNSMSAVEAQHIVSAFSFELGKVSAEAG IRERVVAQLNLVEHDLASQVALQLGLPAPAPQSADEALPPSPALSQLSTTRDSIATRRIAVLAADGVDIHGVELLRAALE ESDAIVEILAPTGGGTLTGESGGELRVDRAMTTMASVLYDAVVVPSGAESAWRLARNGFAVHFVSEAYKHLKPVAAYGSG LDLLRAASVVETLATTTEIVVDDGVVTTTAEANALPAEFVAAFVTAISRHRAWERETEMVPA
Sequences:
>Translated_702_residues MDRTSNPKQEQLDTSRVDRASGYLTTQQGVRVDHTDDALTAGVRGPTLLEDFHAREIVTHFDHERIPERVVHARGAGAYG YFEPYDAWLSDFTAAKFLTTPGLRTPVFVRFSTVAGSRGSADTVRDVRGFATKFYTQQGNYDLVGNNFPVFFIQDGIKFP DFVHAVKPEPDNEIPQAASAHDTLWDFVAEQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNDAGEGVFVKFHWKP LLGVHSLLWDECQQIAGKDPDFNRRDLWDAIESGQFPEWELGVQLVPESDEFKFPFDLLDSTKIIPEEQVPVQPVGRMVL DRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSYLDTQLIRLGGPNFAQLPINRPIAEVHNNQRDGFAQHDIPQ GKSSYFKNTLGGGCPALAHEDVFRHYTQRVDGHKIRQRAESFKDFYSQPRMFWNSMSAVEAQHIVSAFSFELGKVSAEAG IRERVVAQLNLVEHDLASQVALQLGLPAPAPQSADEALPPSPALSQLSTTRDSIATRRIAVLAADGVDIHGVELLRAALE ESDAIVEILAPTGGGTLTGESGGELRVDRAMTTMASVLYDAVVVPSGAESAWRLARNGFAVHFVSEAYKHLKPVAAYGSG LDLLRAASVVETLATTTEIVVDDGVVTTTAEANALPAEFVAAFVTAISRHRAWERETEMVPA >Mature_702_residues MDRTSNPKQEQLDTSRVDRASGYLTTQQGVRVDHTDDALTAGVRGPTLLEDFHAREIVTHFDHERIPERVVHARGAGAYG YFEPYDAWLSDFTAAKFLTTPGLRTPVFVRFSTVAGSRGSADTVRDVRGFATKFYTQQGNYDLVGNNFPVFFIQDGIKFP DFVHAVKPEPDNEIPQAASAHDTLWDFVAEQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNDAGEGVFVKFHWKP LLGVHSLLWDECQQIAGKDPDFNRRDLWDAIESGQFPEWELGVQLVPESDEFKFPFDLLDSTKIIPEEQVPVQPVGRMVL DRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSYLDTQLIRLGGPNFAQLPINRPIAEVHNNQRDGFAQHDIPQ GKSSYFKNTLGGGCPALAHEDVFRHYTQRVDGHKIRQRAESFKDFYSQPRMFWNSMSAVEAQHIVSAFSFELGKVSAEAG IRERVVAQLNLVEHDLASQVALQLGLPAPAPQSADEALPPSPALSQLSTTRDSIATRRIAVLAADGVDIHGVELLRAALE ESDAIVEILAPTGGGTLTGESGGELRVDRAMTTMASVLYDAVVVPSGAESAWRLARNGFAVHFVSEAYKHLKPVAAYGSG LDLLRAASVVETLATTTEIVVDDGVVTTTAEANALPAEFVAAFVTAISRHRAWERETEMVPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=522, Percent_Identity=39.8467432950192, Blast_Score=360, Evalue=3e-99, Organism=Escherichia coli, GI48994891, Length=713, Percent_Identity=50.9116409537167, Blast_Score=684, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=501, Percent_Identity=42.7145708582834, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25147792, Length=505, Percent_Identity=41.5841584158416, Blast_Score=371, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25151141, Length=485, Percent_Identity=42.4742268041237, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6320462, Length=355, Percent_Identity=44.7887323943662, Blast_Score=307, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6321525, Length=338, Percent_Identity=42.8994082840237, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI17981717, Length=496, Percent_Identity=40.7258064516129, Blast_Score=357, Evalue=2e-98, Organism=Drosophila melanogaster, GI19920968, Length=477, Percent_Identity=40.041928721174, Blast_Score=342, Evalue=5e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 - InterPro: IPR002818 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel; PF01965 DJ-1_PfpI [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 77671; Mature: 77671
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTSNPKQEQLDTSRVDRASGYLTTQQGVRVDHTDDALTAGVRGPTLLEDFHAREIVTH CCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHH FDHERIPERVVHARGAGAYGYFEPYDAWLSDFTAAKFLTTPGLRTPVFVRFSTVAGSRGS HCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC ADTVRDVRGFATKFYTQQGNYDLVGNNFPVFFIQDGIKFPDFVHAVKPEPDNEIPQAASA HHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCH HDTLWDFVAEQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNDAGEGVFVKFHWKP HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEECCH LLGVHSLLWDECQQIAGKDPDFNRRDLWDAIESGQFPEWELGVQLVPESDEFKFPFDLLD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHC STKIIPEEQVPVQPVGRMVLDRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSY CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCH LDTQLIRLGGPNFAQLPINRPIAEVHNNQRDGFAQHDIPQGKSSYFKNTLGGGCPALAHE HHHHHHEECCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH DVFRHYTQRVDGHKIRQRAESFKDFYSQPRMFWNSMSAVEAQHIVSAFSFELGKVSAEAG HHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IRERVVAQLNLVEHDLASQVALQLGLPAPAPQSADEALPPSPALSQLSTTRDSIATRRIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEE VLAADGVDIHGVELLRAALEESDAIVEILAPTGGGTLTGESGGELRVDRAMTTMASVLYD EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHHHHH AVVVPSGAESAWRLARNGFAVHFVSEAYKHLKPVAAYGSGLDLLRAASVVETLATTTEIV HHCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEE VDDGVVTTTAEANALPAEFVAAFVTAISRHRAWERETEMVPA EECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDRTSNPKQEQLDTSRVDRASGYLTTQQGVRVDHTDDALTAGVRGPTLLEDFHAREIVTH CCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHH FDHERIPERVVHARGAGAYGYFEPYDAWLSDFTAAKFLTTPGLRTPVFVRFSTVAGSRGS HCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC ADTVRDVRGFATKFYTQQGNYDLVGNNFPVFFIQDGIKFPDFVHAVKPEPDNEIPQAASA HHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCH HDTLWDFVAEQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNDAGEGVFVKFHWKP HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEECCH LLGVHSLLWDECQQIAGKDPDFNRRDLWDAIESGQFPEWELGVQLVPESDEFKFPFDLLD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHC STKIIPEEQVPVQPVGRMVLDRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSY CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCH LDTQLIRLGGPNFAQLPINRPIAEVHNNQRDGFAQHDIPQGKSSYFKNTLGGGCPALAHE HHHHHHEECCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH DVFRHYTQRVDGHKIRQRAESFKDFYSQPRMFWNSMSAVEAQHIVSAFSFELGKVSAEAG HHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IRERVVAQLNLVEHDLASQVALQLGLPAPAPQSADEALPPSPALSQLSTTRDSIATRRIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEE VLAADGVDIHGVELLRAALEESDAIVEILAPTGGGTLTGESGGELRVDRAMTTMASVLYD EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHHHHH AVVVPSGAESAWRLARNGFAVHFVSEAYKHLKPVAAYGSGLDLLRAASVVETLATTTEIV HHCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEE VDDGVVTTTAEANALPAEFVAAFVTAISRHRAWERETEMVPA EECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8821941 [H]