| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629603
Identifier: 169629603
GI number: 169629603
Start: 2569907
End: 2570383
Strand: Reverse
Name: 169629603
Synonym: MAB_2517c
Alternate gene names: NA
Gene position: 2570383-2569907 (Counterclockwise)
Preceding gene: 169629605
Following gene: 169629602
Centisome position: 50.73
GC content: 57.44
Gene sequence:
>477_bases GTGTGGGGTAATTCATGCGGCGAGCAGGCAGGAGCCCCCCAGATGCGAAATAGCACCAGCCCGCACGATAAGGCCATTTA TCCGTCCGAGGTAAGCCAACACGTTTCGGCATTCGACAGATTCGCGACCACCATGTCGGGGCACGTCTCGCAGCCATGGT TTTTCGTCATGTGTGTGCTGATTGTGGTCGTGTGGGCACCAAGCTTCGCCTTCCTCAACATCGATACCTGGCAGTTGGTC ATCAACACCTTGACCACGATCATCACGTTCTTGCTGGTGGCATTGCTCCAGAACACGCAGCGTAGGTCCGATGACGCGGT CCAGCAGAAGCTCAACGGGATAGCCGACGCGCTCGCCGACATCACTAACGCGTTGGGGCATATGGATCCGCAGCTGGCCC CGCAGCTCGATCGAGACCGGATTGAGCTTCTTGACGCCGTAGGGCTCGAAGAACATGAGAGCACGGATTCGTCATAA
Upstream 100 bases:
>100_bases GAACTCCGCTTCGAGTGGTGAACCCCGTCGGGTTGATGATTACCGCTCCTGCGCGGATCAAACATGTGGGACCGACAGGG CAGACGGTTTAAAGGTTGCC
Downstream 100 bases:
>100_bases CGACGGGTTGACGTGGCGGGCTCGGCTGGCGCTGGTGCCCGGCCTTATCACGCGATGGGCTGGCTCGATTTGGTTGTCGT TGATAGCAATAGCCGTAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MWGNSCGEQAGAPQMRNSTSPHDKAIYPSEVSQHVSAFDRFATTMSGHVSQPWFFVMCVLIVVVWAPSFAFLNIDTWQLV INTLTTIITFLLVALLQNTQRRSDDAVQQKLNGIADALADITNALGHMDPQLAPQLDRDRIELLDAVGLEEHESTDSS
Sequences:
>Translated_158_residues MWGNSCGEQAGAPQMRNSTSPHDKAIYPSEVSQHVSAFDRFATTMSGHVSQPWFFVMCVLIVVVWAPSFAFLNIDTWQLV INTLTTIITFLLVALLQNTQRRSDDAVQQKLNGIADALADITNALGHMDPQLAPQLDRDRIELLDAVGLEEHESTDSS >Mature_158_residues MWGNSCGEQAGAPQMRNSTSPHDKAIYPSEVSQHVSAFDRFATTMSGHVSQPWFFVMCVLIVVVWAPSFAFLNIDTWQLV INTLTTIITFLLVALLQNTQRRSDDAVQQKLNGIADALADITNALGHMDPQLAPQLDRDRIELLDAVGLEEHESTDSS
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17470; Mature: 17470
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGNSCGEQAGAPQMRNSTSPHDKAIYPSEVSQHVSAFDRFATTMSGHVSQPWFFVMCVL CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVVVWAPSFAFLNIDTWQLVINTLTTIITFLLVALLQNTQRRSDDAVQQKLNGIADALAD HHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ITNALGHMDPQLAPQLDRDRIELLDAVGLEEHESTDSS HHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MWGNSCGEQAGAPQMRNSTSPHDKAIYPSEVSQHVSAFDRFATTMSGHVSQPWFFVMCVL CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVVVWAPSFAFLNIDTWQLVINTLTTIITFLLVALLQNTQRRSDDAVQQKLNGIADALAD HHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ITNALGHMDPQLAPQLDRDRIELLDAVGLEEHESTDSS HHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA