| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629583
Identifier: 169629583
GI number: 169629583
Start: 2552153
End: 2552770
Strand: Reverse
Name: 169629583
Synonym: MAB_2497c
Alternate gene names: NA
Gene position: 2552770-2552153 (Counterclockwise)
Preceding gene: 169629584
Following gene: 169629580
Centisome position: 50.38
GC content: 60.36
Gene sequence:
>618_bases ATGACCGGCGCCAATCGATTTTGGATCGCACTGGCGGTGGGGATGATGGCCGGGGCATTGACCGGGGCTGTACTAGCACG CTGGCAGGTGGCTCTGCTCGCGGTGGTCATCGTGACCGCCGTCATCAACGTCGCGTGGTCACTTGTTGTGTTGTGGCCCA TGGACCCCGATCAAACGCGCACCCGCGCCGGCAGTGAGGACATGGACGACGAGCTAGGCGATCTTGCGATGCTGCTGATC CTCGTGGCCAGCCTCTCGGCAATCGGCATACTCCTGGTCTCTGCCAACGATGAGGACAAGGGCACTTACGCGGCCCTGTG TATCGGTGCCATCTTGACGGTGTGGGCGATGCTGCACACGATCTACGCCGCCCGATACGCGCGCATCTACTACCAGGGCG CCCCAGGCGGCATCGACTTCAATTCCGATGTGCCGCCGCGGTATGTGGATTTCTACTACTTCTCATTCAATCTCGGCATG ACCTACCAGGTCTCCGACACCGCCGTCACCACCTCACACCTGCGCGACGTGGTGTTGAAGCACTGCCTTTTCAGTTATAT CTACGGCACGGTGATCATCGCGTGCACGATCAACCTGGTGATCAACCTGGTCGGCTAG
Upstream 100 bases:
>100_bases GTAACCGCACCTCGACCACGACGACGGCGACCAGCACGCCACACCCCTAGTACGGCAGGAATCCCTATCGAAGCCAGGAT GACGAGATGGTGGTGTTTTC
Downstream 100 bases:
>100_bases CCCTGGGTGCTGCGCGCGATCCCGTACCGTGCGGTGTGAAAGTCGCGGTTGCCGAACTCTGACTCAATGACGGTGAGACG CTTGAAATAATGGCCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTGANRFWIALAVGMMAGALTGAVLARWQVALLAVVIVTAVINVAWSLVVLWPMDPDQTRTRAGSEDMDDELGDLAMLLI LVASLSAIGILLVSANDEDKGTYAALCIGAILTVWAMLHTIYAARYARIYYQGAPGGIDFNSDVPPRYVDFYYFSFNLGM TYQVSDTAVTTSHLRDVVLKHCLFSYIYGTVIIACTINLVINLVG
Sequences:
>Translated_205_residues MTGANRFWIALAVGMMAGALTGAVLARWQVALLAVVIVTAVINVAWSLVVLWPMDPDQTRTRAGSEDMDDELGDLAMLLI LVASLSAIGILLVSANDEDKGTYAALCIGAILTVWAMLHTIYAARYARIYYQGAPGGIDFNSDVPPRYVDFYYFSFNLGM TYQVSDTAVTTSHLRDVVLKHCLFSYIYGTVIIACTINLVINLVG >Mature_204_residues TGANRFWIALAVGMMAGALTGAVLARWQVALLAVVIVTAVINVAWSLVVLWPMDPDQTRTRAGSEDMDDELGDLAMLLIL VASLSAIGILLVSANDEDKGTYAALCIGAILTVWAMLHTIYAARYARIYYQGAPGGIDFNSDVPPRYVDFYYFSFNLGMT YQVSDTAVTTSHLRDVVLKHCLFSYIYGTVIIACTINLVINLVG
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22281; Mature: 22150
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGANRFWIALAVGMMAGALTGAVLARWQVALLAVVIVTAVINVAWSLVVLWPMDPDQTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRAGSEDMDDELGDLAMLLILVASLSAIGILLVSANDEDKGTYAALCIGAILTVWAMLHT HCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IYAARYARIYYQGAPGGIDFNSDVPPRYVDFYYFSFNLGMTYQVSDTAVTTSHLRDVVLK HHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEEEECCHHHHHHHHHHHHHH HCLFSYIYGTVIIACTINLVINLVG HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGANRFWIALAVGMMAGALTGAVLARWQVALLAVVIVTAVINVAWSLVVLWPMDPDQTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRAGSEDMDDELGDLAMLLILVASLSAIGILLVSANDEDKGTYAALCIGAILTVWAMLHT HCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IYAARYARIYYQGAPGGIDFNSDVPPRYVDFYYFSFNLGMTYQVSDTAVTTSHLRDVVLK HHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEEEECCHHHHHHHHHHHHHH HCLFSYIYGTVIIACTINLVINLVG HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA