Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629565
Identifier: 169629565
GI number: 169629565
Start: 2530670
End: 2531326
Strand: Reverse
Name: 169629565
Synonym: MAB_2479c
Alternate gene names: NA
Gene position: 2531326-2530670 (Counterclockwise)
Preceding gene: 169629569
Following gene: 169629564
Centisome position: 49.96
GC content: 68.19
Gene sequence:
>657_bases GTGAACCTGTTCACCCACAGCTGGGCCACGCTGCGTGCGGCGGTTGCGGACCTGCCGATTCAGGCGTTTGCACAGCCCTC CGGCTGCGCCGGCTGGCTCGTACGCGACCTGGTGTGCCATTTGATCATCGATGCCCAGGATGTGCTGATCACGCTGGCAA CCCCGAGCGACCAGGCACCGACGCATGATGCGGTGACCTACTGGAAGCTTCTCGATTCGCCCCCTACCGGGCGGGATCCA CTCGACGCGCTGATCGTGCGGCTCGCCGCGGCCTACCGGGACCCCAGTCTGCTGTCCTTTCATCTGGACGACGTCGGGGC CGCAGCGGGACGCGCCGCCGCGCTCGCCGACGGCAAGCAGCCGATCGCCACCAAGGGGCAGGTCCTCACCACGGCTGACT ACCTCGACGCCTACGTCCTGGAATGGACCCTGCATCATCTCGACCTGATCGCGCACCTGCCCGAGCTTGCGACGCCGCCG ACAGAAGGCCTCGGCTACGCGCGCGGATTGATGGAGCGGATCGGCGGATTCGAATTCCCGGCCCAGATCCCTGACACGGA CGCACTCCTGGTCGGCACCGGACGGCGTGCCGCAAGCGCGTACGAGGCAGAGGCCCTGGGGCCGCTTCACGAGCGGCTCC CCCTGCTCCTGGCCTGA
Upstream 100 bases:
>100_bases CTCCATGCCTCCCAAATTCGTACGCCTCTGAGAGTAGAGGTCGGATGCGGCGCCCCGGCAGTTCCGTGCCACTTGACGAC CGCAGTGCTAGCTTGCGGCG
Downstream 100 bases:
>100_bases CACACAAAATTCCATTAGGGCAGTACCGTTCCGGCCATGAGATTGCACGCGTCACGAGAGATCGCGGCGTCCCCGTCCAG CATCTTCGCGGCGTTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNLFTHSWATLRAAVADLPIQAFAQPSGCAGWLVRDLVCHLIIDAQDVLITLATPSDQAPTHDAVTYWKLLDSPPTGRDP LDALIVRLAAAYRDPSLLSFHLDDVGAAAGRAAALADGKQPIATKGQVLTTADYLDAYVLEWTLHHLDLIAHLPELATPP TEGLGYARGLMERIGGFEFPAQIPDTDALLVGTGRRAASAYEAEALGPLHERLPLLLA
Sequences:
>Translated_218_residues MNLFTHSWATLRAAVADLPIQAFAQPSGCAGWLVRDLVCHLIIDAQDVLITLATPSDQAPTHDAVTYWKLLDSPPTGRDP LDALIVRLAAAYRDPSLLSFHLDDVGAAAGRAAALADGKQPIATKGQVLTTADYLDAYVLEWTLHHLDLIAHLPELATPP TEGLGYARGLMERIGGFEFPAQIPDTDALLVGTGRRAASAYEAEALGPLHERLPLLLA >Mature_218_residues MNLFTHSWATLRAAVADLPIQAFAQPSGCAGWLVRDLVCHLIIDAQDVLITLATPSDQAPTHDAVTYWKLLDSPPTGRDP LDALIVRLAAAYRDPSLLSFHLDDVGAAAGRAAALADGKQPIATKGQVLTTADYLDAYVLEWTLHHLDLIAHLPELATPP TEGLGYARGLMERIGGFEFPAQIPDTDALLVGTGRRAASAYEAEALGPLHERLPLLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23327; Mature: 23327
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFTHSWATLRAAVADLPIQAFAQPSGCAGWLVRDLVCHLIIDAQDVLITLATPSDQAP CCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC THDAVTYWKLLDSPPTGRDPLDALIVRLAAAYRDPSLLSFHLDDVGAAAGRAAALADGKQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCHHHHCCCCC PIATKGQVLTTADYLDAYVLEWTLHHLDLIAHLPELATPPTEGLGYARGLMERIGGFEFP CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC AQIPDTDALLVGTGRRAASAYEAEALGPLHERLPLLLA CCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHCCHHCC >Mature Secondary Structure MNLFTHSWATLRAAVADLPIQAFAQPSGCAGWLVRDLVCHLIIDAQDVLITLATPSDQAP CCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC THDAVTYWKLLDSPPTGRDPLDALIVRLAAAYRDPSLLSFHLDDVGAAAGRAAALADGKQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCHHHHCCCCC PIATKGQVLTTADYLDAYVLEWTLHHLDLIAHLPELATPPTEGLGYARGLMERIGGFEFP CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC AQIPDTDALLVGTGRRAASAYEAEALGPLHERLPLLLA CCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA