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The map label for this gene is ybiT [H]

Identifier: 169629441

GI number: 169629441

Start: 2410335

End: 2411993

Strand: Reverse

Name: ybiT [H]

Synonym: MAB_2355c

Alternate gene names: 169629441

Gene position: 2411993-2410335 (Counterclockwise)

Preceding gene: 169629460

Following gene: 169629437

Centisome position: 47.6

GC content: 64.5

Gene sequence:

>1659_bases
ATGAGCCATGTGCAGCTCGATGCCATCGGCTACCACCTTCCCGACGGCAGAGCACTACTTCACGATGTCAGCCTGCGGGT
CGGCGAGGGCAGCAAGACCGCCCTGATAGGCCCCAACGGGACCGGTAAGACGACACTGCTGCGGATTATCGCCGGCGATG
CCGATCCACACGACGGAGCCGTCACCCGCGGTGGGCAGCTTGGAGTGATGCGGCAGTTCATCGGTTCGGTTCGTGATGAT
TCGACGGTCCGCGATCTGCTGCTGTCGGTAGCACCCGATCGCATCAGGCGGGCCGCCGAGCATCTCGACCGCGCGGAGCT
GGCACTCATGGAGTGCGACAGTGAGCAGGACCAGATCAAGTACGCACAGGCGCTGGCGGACTGGGCCGACGTTGGCGGCT
ACGAATTCGAGACTCAGTGCGACGTACACACCACAGCCGCGCTCGGAATTCCGTATGAGCTGGCCAGATTTCGCGGCGTC
AACACACTTTCCGGCGGTCAGCAGAAGCGATTGGTTCTGGAATCGCTGCTGGGCGGGCCCCACCAGGTCTTGCTGCTGGA
TGAACCCGACAACTATCTGGATGTCCCGGCCAAACGTTGGCTCGAGGAGCGGCTCGTGGAGTCGCCCAAGACCATCCTGT
TCGTCAGTCACGACCGCGAGCTGATCAATCGCGCGGCCGGGCAGATTGCCACCCTGGAACCCACCCGGGCCGGATCGACG
CTATGGGTGCATCCGGGTTCGTTCACGACGTACCACCAGGCACGCGCGGACCGGAATGCCAAACTCGCGGAACTACGACG
CCGGTGGGACGAACAGCGGGCGGCGCTTCGCGACCTGGTGTTGATGTACCGGCAGAAGGCGGCCTACAACTCCGATATGG
CTAGCCGCCTGCAGGCCGCCGAGACGCGGCTGCGCCGCTTCGATGAGGCCGGGCCGCCGGAGGCAGTTCCATTGCGGCAG
AACGTTCGCATGCGGCTCGCCGGCGGACGCACCGCCAAGCGTGCCGTGATCGCGGACAACCTCGAATTAACCGGCTTGAC
AAGACCTTTCGATACCGAGCTGTGGTACGGCGATCGGGTTGCGGTGTTGGGTGGAAACGGAACCGGCAAGTCGCATTTCC
TGCGCCTACTGGCCTGCGGCGGCACCGACCCGGAACTGGACCAGCTGCCGGTCGGCGACATGATTCCCGAGCCGGTAAAT
CACGACGGGCGGCTTCGGTTGGGCGCGCGGGTGCGTCCTGGCTGGTTCGCACAGACACATCATCACGCGGGGCTGATGGA
TCGGACGCTGCTGGACATCCTGCATCACGGGGACGAAAGGCGCGCCGGGCACGGGCGTGAGCAGGCTTCGCGAATCCTGG
ATCGCTACGGGCTCGCGCCCTCGGCAGAGCAGACATTCAGCTCGCTGTCCGGCGGGCAGCAGGGCCGCTTCCAGATCCTG
CTGCTGGAGTTGATGGGCTCGACCCTGCTGCTGCTCGATGAGCCCACCGACAACCTGGATCTGCATTCCGCCGAAGCGCT
GGAGGACGCCCTGGCAGCCTTCGACGGAACGGTCATCGCCGTCACCCACGATCGGTGGTTCGCCCGAACTTTCACCCGTT
TCCTCATCTTCGGCGAGGACGGCAAGGTAAGGGAATCCGTTGAACCCCAATGGGTATAA

Upstream 100 bases:

>100_bases
TGGGCGTGTCCTCCTTCTACGAGCGCGAGTATGCCGGTAGCGGACCCTCTGCAGGAAATTCGGTGGCGATCCATGTGACC
GGTTCCGCACACTGGACGGC

Downstream 100 bases:

>100_bases
CGGAGCGATCGGCTAGCGGAGCCGCTGCACCCCGGCGATATTGCGCTTGCCGCGGCGCAGCACCAGCCAACCTCCGGTGA
GGTAGTCGCCATCGCCCGGG

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSHVQLDAIGYHLPDGRALLHDVSLRVGEGSKTALIGPNGTGKTTLLRIIAGDADPHDGAVTRGGQLGVMRQFIGSVRDD
STVRDLLLSVAPDRIRRAAEHLDRAELALMECDSEQDQIKYAQALADWADVGGYEFETQCDVHTTAALGIPYELARFRGV
NTLSGGQQKRLVLESLLGGPHQVLLLDEPDNYLDVPAKRWLEERLVESPKTILFVSHDRELINRAAGQIATLEPTRAGST
LWVHPGSFTTYHQARADRNAKLAELRRRWDEQRAALRDLVLMYRQKAAYNSDMASRLQAAETRLRRFDEAGPPEAVPLRQ
NVRMRLAGGRTAKRAVIADNLELTGLTRPFDTELWYGDRVAVLGGNGTGKSHFLRLLACGGTDPELDQLPVGDMIPEPVN
HDGRLRLGARVRPGWFAQTHHHAGLMDRTLLDILHHGDERRAGHGREQASRILDRYGLAPSAEQTFSSLSGGQQGRFQIL
LLELMGSTLLLLDEPTDNLDLHSAEALEDALAAFDGTVIAVTHDRWFARTFTRFLIFGEDGKVRESVEPQWV

Sequences:

>Translated_552_residues
MSHVQLDAIGYHLPDGRALLHDVSLRVGEGSKTALIGPNGTGKTTLLRIIAGDADPHDGAVTRGGQLGVMRQFIGSVRDD
STVRDLLLSVAPDRIRRAAEHLDRAELALMECDSEQDQIKYAQALADWADVGGYEFETQCDVHTTAALGIPYELARFRGV
NTLSGGQQKRLVLESLLGGPHQVLLLDEPDNYLDVPAKRWLEERLVESPKTILFVSHDRELINRAAGQIATLEPTRAGST
LWVHPGSFTTYHQARADRNAKLAELRRRWDEQRAALRDLVLMYRQKAAYNSDMASRLQAAETRLRRFDEAGPPEAVPLRQ
NVRMRLAGGRTAKRAVIADNLELTGLTRPFDTELWYGDRVAVLGGNGTGKSHFLRLLACGGTDPELDQLPVGDMIPEPVN
HDGRLRLGARVRPGWFAQTHHHAGLMDRTLLDILHHGDERRAGHGREQASRILDRYGLAPSAEQTFSSLSGGQQGRFQIL
LLELMGSTLLLLDEPTDNLDLHSAEALEDALAAFDGTVIAVTHDRWFARTFTRFLIFGEDGKVRESVEPQWV
>Mature_551_residues
SHVQLDAIGYHLPDGRALLHDVSLRVGEGSKTALIGPNGTGKTTLLRIIAGDADPHDGAVTRGGQLGVMRQFIGSVRDDS
TVRDLLLSVAPDRIRRAAEHLDRAELALMECDSEQDQIKYAQALADWADVGGYEFETQCDVHTTAALGIPYELARFRGVN
TLSGGQQKRLVLESLLGGPHQVLLLDEPDNYLDVPAKRWLEERLVESPKTILFVSHDRELINRAAGQIATLEPTRAGSTL
WVHPGSFTTYHQARADRNAKLAELRRRWDEQRAALRDLVLMYRQKAAYNSDMASRLQAAETRLRRFDEAGPPEAVPLRQN
VRMRLAGGRTAKRAVIADNLELTGLTRPFDTELWYGDRVAVLGGNGTGKSHFLRLLACGGTDPELDQLPVGDMIPEPVNH
DGRLRLGARVRPGWFAQTHHHAGLMDRTLLDILHHGDERRAGHGREQASRILDRYGLAPSAEQTFSSLSGGQQGRFQILL
LELMGSTLLLLDEPTDNLDLHSAEALEDALAAFDGTVIAVTHDRWFARTFTRFLIFGEDGKVRESVEPQWV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=558, Percent_Identity=28.8530465949821, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI10947137, Length=533, Percent_Identity=25.703564727955, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI27881506, Length=533, Percent_Identity=25.703564727955, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI10947135, Length=539, Percent_Identity=25.7884972170686, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI69354671, Length=539, Percent_Identity=25.7884972170686, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI1787041, Length=533, Percent_Identity=29.6435272045028, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI2367384, Length=549, Percent_Identity=27.6867030965392, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1787182, Length=537, Percent_Identity=27.7467411545624, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1789751, Length=544, Percent_Identity=27.5735294117647, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=29.6803652968037, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786872, Length=110, Percent_Identity=34.5454545454545, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=563, Percent_Identity=27.708703374778, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=27.1880819366853, Blast_Score=135, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17553372, Length=544, Percent_Identity=27.5735294117647, Blast_Score=124, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6321121, Length=564, Percent_Identity=26.5957446808511, Blast_Score=143, Evalue=9e-35,
Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=23.2954545454545, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=28.2527881040892, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24641342, Length=549, Percent_Identity=27.3224043715847, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24642252, Length=527, Percent_Identity=25.6166982922201, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18859989, Length=527, Percent_Identity=25.6166982922201, Blast_Score=127, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61174; Mature: 61043

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVQLDAIGYHLPDGRALLHDVSLRVGEGSKTALIGPNGTGKTTLLRIIAGDADPHDGA
CCCEEEEEECEECCCCCEEHHHCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCC
VTRGGQLGVMRQFIGSVRDDSTVRDLLLSVAPDRIRRAAEHLDRAELALMECDSEQDQIK
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YAQALADWADVGGYEFETQCDVHTTAALGIPYELARFRGVNTLSGGQQKRLVLESLLGGP
HHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
HQVLLLDEPDNYLDVPAKRWLEERLVESPKTILFVSHDRELINRAAGQIATLEPTRAGST
EEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEECCCCCCCE
LWVHPGSFTTYHQARADRNAKLAELRRRWDEQRAALRDLVLMYRQKAAYNSDMASRLQAA
EEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ETRLRRFDEAGPPEAVPLRQNVRMRLAGGRTAKRAVIADNLELTGLTRPFDTELWYGDRV
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCCCCCCEEECCEE
AVLGGNGTGKSHFLRLLACGGTDPELDQLPVGDMIPEPVNHDGRLRLGARVRPGWFAQTH
EEEECCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
HHAGLMDRTLLDILHHGDERRAGHGREQASRILDRYGLAPSAEQTFSSLSGGQQGRFQIL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEE
LLELMGSTLLLLDEPTDNLDLHSAEALEDALAAFDGTVIAVTHDRWFARTFTRFLIFGED
EEHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHEEEECCC
GKVRESVEPQWV
CCCCCCCCCCCC
>Mature Secondary Structure 
SHVQLDAIGYHLPDGRALLHDVSLRVGEGSKTALIGPNGTGKTTLLRIIAGDADPHDGA
CCEEEEEECEECCCCCEEHHHCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCC
VTRGGQLGVMRQFIGSVRDDSTVRDLLLSVAPDRIRRAAEHLDRAELALMECDSEQDQIK
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YAQALADWADVGGYEFETQCDVHTTAALGIPYELARFRGVNTLSGGQQKRLVLESLLGGP
HHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
HQVLLLDEPDNYLDVPAKRWLEERLVESPKTILFVSHDRELINRAAGQIATLEPTRAGST
EEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEECCCCCCCE
LWVHPGSFTTYHQARADRNAKLAELRRRWDEQRAALRDLVLMYRQKAAYNSDMASRLQAA
EEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ETRLRRFDEAGPPEAVPLRQNVRMRLAGGRTAKRAVIADNLELTGLTRPFDTELWYGDRV
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCCCCCCEEECCEE
AVLGGNGTGKSHFLRLLACGGTDPELDQLPVGDMIPEPVNHDGRLRLGARVRPGWFAQTH
EEEECCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
HHAGLMDRTLLDILHHGDERRAGHGREQASRILDRYGLAPSAEQTFSSLSGGQQGRFQIL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEE
LLELMGSTLLLLDEPTDNLDLHSAEALEDALAAFDGTVIAVTHDRWFARTFTRFLIFGED
EEHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHEEEECCC
GKVRESVEPQWV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]