| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629357
Identifier: 169629357
GI number: 169629357
Start: 2318268
End: 2318732
Strand: Reverse
Name: 169629357
Synonym: MAB_2271c
Alternate gene names: NA
Gene position: 2318732-2318268 (Counterclockwise)
Preceding gene: 169629358
Following gene: 169629356
Centisome position: 45.76
GC content: 64.95
Gene sequence:
>465_bases GTGAAGATCGTCATCCCGGCAGCAGTCGCGCTGTCATTGCTCGCCGGTTGTTCGGCGCATGAGTCCACCCCCGCCGAGCA GGCAGCGACGGTAACCATCACCGACCAGTGGGCCAAGTCCGCCCCAGACGGCTCGATGACCTCTGTATTCGGCACCGTGC ACAACAACGGTTCCACCGAGGCGCGCATCGTCTCGGCCACCTCGCCTGCCGCGAAATCCGTGGAGCTTCATGAGGTGACC GCAGGCGGTTTGATGCGTCCCAAGGAAGGTGGGGTCGTCATTCCGGCCCACGGCGAACATAAGCTCTCACCCGGGGGCGA CCACGTCATGCTTATGGGACTGACCACTCCCCTGCGCCCGGGCCAGGACGTCGTCATCACCCTGGCCTTCCAGGATGGCT CGACCACGCCGATGACCGCCCAGATCCGCGACTTCGCAGGCGGCAACGAGAACTACCAGCCCTGA
Upstream 100 bases:
>100_bases GGGTGCCACATCCGCCACGGAGCAGCTCTTCGCCGAGCTGAGGCTGAGCCGCGATCAGCCCGGGCGGAACTTTCCCCACC ATCCACACGACTAGCTGAAC
Downstream 100 bases:
>100_bases CCATGTCGTCTCGTTCTCTGTCCCGACGGGGGCTCATTGTCGGCGGCGGCGCAGCGGCCGCCCTCACCGCGGGCGCCGGG TTGTCGGCCTGGTCCGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKIVIPAAVALSLLAGCSAHESTPAEQAATVTITDQWAKSAPDGSMTSVFGTVHNNGSTEARIVSATSPAAKSVELHEVT AGGLMRPKEGGVVIPAHGEHKLSPGGDHVMLMGLTTPLRPGQDVVITLAFQDGSTTPMTAQIRDFAGGNENYQP
Sequences:
>Translated_154_residues MKIVIPAAVALSLLAGCSAHESTPAEQAATVTITDQWAKSAPDGSMTSVFGTVHNNGSTEARIVSATSPAAKSVELHEVT AGGLMRPKEGGVVIPAHGEHKLSPGGDHVMLMGLTTPLRPGQDVVITLAFQDGSTTPMTAQIRDFAGGNENYQP >Mature_154_residues MKIVIPAAVALSLLAGCSAHESTPAEQAATVTITDQWAKSAPDGSMTSVFGTVHNNGSTEARIVSATSPAAKSVELHEVT AGGLMRPKEGGVVIPAHGEHKLSPGGDHVMLMGLTTPLRPGQDVVITLAFQDGSTTPMTAQIRDFAGGNENYQP
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 15842; Mature: 15842
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIPAAVALSLLAGCSAHESTPAEQAATVTITDQWAKSAPDGSMTSVFGTVHNNGSTE CEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCEEEEEEEECCCCCC ARIVSATSPAAKSVELHEVTAGGLMRPKEGGVVIPAHGEHKLSPGGDHVMLMGLTTPLRP EEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC GQDVVITLAFQDGSTTPMTAQIRDFAGGNENYQP CCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKIVIPAAVALSLLAGCSAHESTPAEQAATVTITDQWAKSAPDGSMTSVFGTVHNNGSTE CEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCEEEEEEEECCCCCC ARIVSATSPAAKSVELHEVTAGGLMRPKEGGVVIPAHGEHKLSPGGDHVMLMGLTTPLRP EEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC GQDVVITLAFQDGSTTPMTAQIRDFAGGNENYQP CCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA