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The map label for this gene is yktD [H]

Identifier: 169629339

GI number: 169629339

Start: 2282551

End: 2283393

Strand: Direct

Name: yktD [H]

Synonym: MAB_2253

Alternate gene names: 169629339

Gene position: 2282551-2283393 (Clockwise)

Preceding gene: 169629338

Following gene: 169629341

Centisome position: 45.05

GC content: 63.82

Gene sequence:

>843_bases
GTGAGCAACCCCGCCGCAGGGAAGCCAGACCACACGGCGCTACGTACCGCCTTGTGGCGGGCTCTGCACGTGGAACTCGA
TCCACCGCCGCATGTGCTGACCGACCTCGTTGGCCTGCAATTGGCGGCGCCCGAAGAGGATTGGCGTGAACGTCCCGATA
TGGATCCGCATGGAACTGTCGATTCCCGCTTGGGCATGGTGGCCCGGGCTCGCTTTGTCGAGGATCTCGTCAAACGTCGT
GCGGCGGAGGGCGTGGGGCAATACGTCATTTTGGGGGCAGGGCTGGACACGTTCGTGCAGCGGCATCCCGATGCGGGCGA
GCGGCTCACAGTTTTTGAAGTCGATCGGCCCGAGACGCAGGCCTGGAAAAGAAAACGGCTGACCGACTGCGGCTTCCAGA
TACCACGTTGGCAGCGGCTGGTCCCCGTGGACTTCGAGGCAGGAGCATGTTGGCGGGAGCAACTGGAGATCGCGGGATTC
GACTCCGGTAGACCCGCCGTGGTCGCGTCCACGGGCGTCAGCATGTATCTGACCCGTGCGGCCATCGTTGCGACATTACG
TCAATGTGCCTCACTTGCAACGGGTTCCACGTTGGCGATGACCTTCCTGCTGCCGGATGCGCTGCTCAACGAGAGCGCGC
GCACCGTTCGGCAACTGATCGTCGCCAGGGCAGCCGCCGCCGGTACGCCGTGGCTGAGCTTCTTCGCTCCCGAGGAGATG
CTCTCGCTAGCTCGCGAATGCGGTTTTGCGCAAGCCTCATACGTGTCCGGCCGCGAACTGATTGAGCGCTATGTGCCCGC
CGCCGGACTCTCTGCCGAGGAGTTCCTGGTGGCAACTGTCTGA

Upstream 100 bases:

>100_bases
ACCCAATTCGAGGAAACACACTTCGGTTCTCGGGCGATGACGGTGCGAGACCCCGACGGCAGAGTTCTTAGTCTTCAGGC
CCCAATCGGCGAGTGATCTC

Downstream 100 bases:

>100_bases
CCGATGGTCGTGACATGCAAGCTAGCCGTCGGTTAACCCCGGCTCAGTCGATAGCTTCATCAGAATCTGTACTCCACGTG
GTGGGGATCATGGGCACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVGLQLAAPEEDWRERPDMDPHGTVDSRLGMVARARFVEDLVKRR
AAEGVGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQAWKRKRLTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGF
DSGRPAVVASTGVSMYLTRAAIVATLRQCASLATGSTLAMTFLLPDALLNESARTVRQLIVARAAAAGTPWLSFFAPEEM
LSLARECGFAQASYVSGRELIERYVPAAGLSAEEFLVATV

Sequences:

>Translated_280_residues
MSNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVGLQLAAPEEDWRERPDMDPHGTVDSRLGMVARARFVEDLVKRR
AAEGVGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQAWKRKRLTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGF
DSGRPAVVASTGVSMYLTRAAIVATLRQCASLATGSTLAMTFLLPDALLNESARTVRQLIVARAAAAGTPWLSFFAPEEM
LSLARECGFAQASYVSGRELIERYVPAAGLSAEEFLVATV
>Mature_279_residues
SNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVGLQLAAPEEDWRERPDMDPHGTVDSRLGMVARARFVEDLVKRRA
AEGVGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQAWKRKRLTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGFD
SGRPAVVASTGVSMYLTRAAIVATLRQCASLATGSTLAMTFLLPDALLNESARTVRQLIVARAAAAGTPWLSFFAPEEML
SLARECGFAQASYVSGRELIERYVPAAGLSAEEFLVATV

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 30679; Mature: 30548

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVGLQLAAPEEDWRERPDMDPHGTV
CCCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHCEECCCCHHHHHCCCCCCCCCH
DSRLGMVARARFVEDLVKRRAAEGVGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCEEEEEECCCCHHH
AWKRKRLTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGFDSGRPAVVASTGVSMYLTRA
HHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHH
AIVATLRQCASLATGSTLAMTFLLPDALLNESARTVRQLIVARAAAAGTPWLSFFAPEEM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
LSLARECGFAQASYVSGRELIERYVPAAGLSAEEFLVATV
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECC
>Mature Secondary Structure 
SNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVGLQLAAPEEDWRERPDMDPHGTV
CCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHCEECCCCHHHHHCCCCCCCCCH
DSRLGMVARARFVEDLVKRRAAEGVGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCEEEEEECCCCHHH
AWKRKRLTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGFDSGRPAVVASTGVSMYLTRA
HHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHH
AIVATLRQCASLATGSTLAMTFLLPDALLNESARTVRQLIVARAAAAGTPWLSFFAPEEM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
LSLARECGFAQASYVSGRELIERYVPAAGLSAEEFLVATV
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]