| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is nadB [H]
Identifier: 169629330
GI number: 169629330
Start: 2269144
End: 2271852
Strand: Direct
Name: nadB [H]
Synonym: MAB_2244
Alternate gene names: 169629330
Gene position: 2269144-2271852 (Clockwise)
Preceding gene: 169629329
Following gene: 169629331
Centisome position: 44.78
GC content: 63.97
Gene sequence:
>2709_bases ATGGAGACCCCCGAACTAGACAGCGCCATCCGGCTGGACTGTGACGTGCTGGTGATCGGCGGTGGTACTGCCGGCACCAT GGCGGCATTGACGGCTGCCGAAAATGGGGCACAGGTGCTTCTTCTGGAGAAGGCGCATGTGCGGCACTCCGGTGCCCTGG CGATGGGTATGGATGGTGTCAACAACGCCGTCATTCCCGGTAAGGCCGAGCCAGAAGATTACGTCGCGGAGATCACCCGC GCCAATGATGGAATCGTCAATCAGCGCACTGTGTATCAAACAGCGACGCGCGGATTCGCTATGGTGCAGCGCCTGGAGCG CTACGGCGTCAAGTTCGAGAAGGACGAGCACGGCGAGTACGCGGTGCGCCGGGTGCACCGGTCGGGCTCCTATGTGCTGC CCATGCCCGAGGGCAAGGACGTCAAGAAGGCGCTGTACCGCGTGCTGCGGCAGAAGTCGATGCGCGAAAAGATCCGCATC GAGAATCGGGTCATGCCGGTGCGGATATTGACCGAGGCACTGGGCGAGGGCGGCGACGGGGGACAGCAGCGCCGAGCCGT CGGTGCGGCGGGCTTCAACACTCGCACCGGCGAATTCGTGACGGTCGGGGCGAAGGCGGTGATCTTGGCGACCGGCCCCT GTGGCCGCCTTGGCCTCCCGGCGTCCGGCTATCTGTATGGCACCTATGAGAATCCGACCAACGCCGGGGACGGGTACGCG ATGGCCTACCACGCCGGTGCCGAGCTGTCGGGGATCGAGTGTTTTCAGATCAACCCACTCATCAAGGATTACAACGGTCC GGCATGCGCGTATGTCGCCAACCCGTTCGGCGGGTATCAGGTGAATGCGCAAGGCGAGCGTTTTGTCGACTCCGATTATT GGTCAGGCCAGATGATGACGGAGGTCAAGAATGAAATCGAGTCGGCGCGGGGCCCTATCTATCTGAAAGTCACCCATCTG CCCGAGGAGACGCTGTCGGCGCTGGAAAATATCCTGCATACCACTGAGCGGCCGACCCGCGGAACTTTTCATGCCAATCG TGGACACGACTATCGTACGCACGATATCGAGATGCACATCTCCGAGATTGGTTTGTGCAGTGGGCATTCCGCCTCGGGAG TATGGGTGGACGAACATGCCCGCACTACGGTGCCGGGTCTGTATGCCGCGGGTGACCTGGCCTGTGTGCCGCACAACTAC ATGATTGGCGCCTTCGTATACGGCGACCTGGCCGGTGAGCACGCGGCCTCCATACTGTCGAAAACGCCTGCACCACTTGA GCTACCGGTAGATCAGCTCAAAGAGGCGCATGAGCTGATCTACCGTCCGCTGCGCCACCCCGACGGCCCACCCCAGCCGC AGGTCGAATACAAGCTGCGTCGCTTCGTCAATGACTACGTGGCTCCGCCCAAGACGGCGGCCAAACTGTCTTTGGCAGTT CAGACATTCGAGCGGATGGCCGAGGAGGTGGGCCAGATCGGGGCGCGTACCCCGCATGAGTTGATGCGGGCCGCCGAGGT GTCGTTCATCAGGGACTGCGCCGAAATGGCGGCACGCTCATCGCTGACGCGCACTGAGTCGCGGTGGGGCCTGTATCACG ACAGGGCTGACCTGCCGGATCGCGACGACGATAACTGGCGCTACCACCTCAACCTGCGCAAGAGCGGCGACGGCATGGAT TTTGTGAAGCGGCCGGTCGCACCGTATTTCGTCCCGGTCCCGGGTCTGGACGATCTTCCCTCGGGGGAAACGGCGCCCAT CGCGGTGCATCAGCCCGAGCTGCTCGGTGCCAAGGCCCCGGCGACTCGGGTCACCACGGCCATCACGATGGACGCGGAGC AGCCTCCGTCGCCACGGATCGCCGCGGTGCTCGCATTGGAGGCGCCCACGGTGCAGGACTTGCTGCAGTACTTGACCGAT GACGATCCGGGTGTGCGGCGCACCGCGATTGCCTCATTGACCGAACATATTCCCGTCGGCTATGAGGCGGCTCTGCTGGA TGCGTTGAGCGACAACGATTCTTCGGTTCGCCGTACTGCCGCCGAGGGGCTGCGTGAACTGGTCGAGATGCTGGAGAACC CAGCTGCGATTCGCGGTTACGTCGGCGCTCCCGATCCGTTGGTGCGCAGCACCGCGCTGTATGTAGCCAGTGCCCGACGT GTCGGCGATCCGGTTGCCTATGTTGTGTCGCTGCGCGACCCCGATCACCGGGTCCGGATCGAAGCCGTGCGGGCGCTGGT CTCGGTGGATGATGCGGGTTCCGTCGCCACCGCGGCCACGGACGAGAATCGTGAAGTACGGATCGCCGTCGCCAACGGAC TTGCCAAGCTGTCCGCCGGAGGCGAGGCGGTGCGGGCGTTGGTACATGACGGTGACCCGCTGGTGAGGGCCGCCGCGCTC ACCGCTCTCGGCGAGTTGGGGGTCGACGACGAGATTCTCCATGCGGTTGAACAGGCGCTGAAGGCTCCGGCTTGGCAGAT CCGTCAAGGAGCAGTGCGCGCCCTGGCGGGGGCGTCCCCCGGGCAAGCCGTGTCCGCACTCGTGCGGGCATTGGCCGATA CACATCTGGATGTGCGCAAGTCGGCGGTACTTAGCCTGAGCCGATGGGTGTCAACGGAGCCCGCTGTGCGGGAGGCGCTG ACGGGTGCGCTTCAGGATGGTGATGCGGATGTGAGAGCCTATGCGCGACAGGCACTTGCGTCCGTCTGA
Upstream 100 bases:
>100_bases CACTCTTGGACGTGCCCGAACCTCGTGAGGCCGATATCGACCGCAGTGGTCTACGCACTGAAATCCTTGCCGCACTGAAT CATACGGAGCTTGTTGCCTA
Downstream 100 bases:
>100_bases TTCGGGAGATCCCAAGCACAGTGGATTCCGTCCGGCAACGTGGCGGAGGTCATGTTACGGGCGGGTTCCGGGGGCACTTA GCATAGGCTAGGCTTACTCA
Product: putative oxidoreductase/HEAT repeat-containing protein
Products: NA
Alternate protein names: LASPO; Quinolinate synthase B [H]
Number of amino acids: Translated: 902; Mature: 902
Protein sequence:
>902_residues METPELDSAIRLDCDVLVIGGGTAGTMAALTAAENGAQVLLLEKAHVRHSGALAMGMDGVNNAVIPGKAEPEDYVAEITR ANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVHRSGSYVLPMPEGKDVKKALYRVLRQKSMREKIRI ENRVMPVRILTEALGEGGDGGQQRRAVGAAGFNTRTGEFVTVGAKAVILATGPCGRLGLPASGYLYGTYENPTNAGDGYA MAYHAGAELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFVDSDYWSGQMMTEVKNEIESARGPIYLKVTHL PEETLSALENILHTTERPTRGTFHANRGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNY MIGAFVYGDLAGEHAASILSKTPAPLELPVDQLKEAHELIYRPLRHPDGPPQPQVEYKLRRFVNDYVAPPKTAAKLSLAV QTFERMAEEVGQIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPDRDDDNWRYHLNLRKSGDGMD FVKRPVAPYFVPVPGLDDLPSGETAPIAVHQPELLGAKAPATRVTTAITMDAEQPPSPRIAAVLALEAPTVQDLLQYLTD DDPGVRRTAIASLTEHIPVGYEAALLDALSDNDSSVRRTAAEGLRELVEMLENPAAIRGYVGAPDPLVRSTALYVASARR VGDPVAYVVSLRDPDHRVRIEAVRALVSVDDAGSVATAATDENREVRIAVANGLAKLSAGGEAVRALVHDGDPLVRAAAL TALGELGVDDEILHAVEQALKAPAWQIRQGAVRALAGASPGQAVSALVRALADTHLDVRKSAVLSLSRWVSTEPAVREAL TGALQDGDADVRAYARQALASV
Sequences:
>Translated_902_residues METPELDSAIRLDCDVLVIGGGTAGTMAALTAAENGAQVLLLEKAHVRHSGALAMGMDGVNNAVIPGKAEPEDYVAEITR ANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVHRSGSYVLPMPEGKDVKKALYRVLRQKSMREKIRI ENRVMPVRILTEALGEGGDGGQQRRAVGAAGFNTRTGEFVTVGAKAVILATGPCGRLGLPASGYLYGTYENPTNAGDGYA MAYHAGAELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFVDSDYWSGQMMTEVKNEIESARGPIYLKVTHL PEETLSALENILHTTERPTRGTFHANRGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNY MIGAFVYGDLAGEHAASILSKTPAPLELPVDQLKEAHELIYRPLRHPDGPPQPQVEYKLRRFVNDYVAPPKTAAKLSLAV QTFERMAEEVGQIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPDRDDDNWRYHLNLRKSGDGMD FVKRPVAPYFVPVPGLDDLPSGETAPIAVHQPELLGAKAPATRVTTAITMDAEQPPSPRIAAVLALEAPTVQDLLQYLTD DDPGVRRTAIASLTEHIPVGYEAALLDALSDNDSSVRRTAAEGLRELVEMLENPAAIRGYVGAPDPLVRSTALYVASARR VGDPVAYVVSLRDPDHRVRIEAVRALVSVDDAGSVATAATDENREVRIAVANGLAKLSAGGEAVRALVHDGDPLVRAAAL TALGELGVDDEILHAVEQALKAPAWQIRQGAVRALAGASPGQAVSALVRALADTHLDVRKSAVLSLSRWVSTEPAVREAL TGALQDGDADVRAYARQALASV >Mature_902_residues METPELDSAIRLDCDVLVIGGGTAGTMAALTAAENGAQVLLLEKAHVRHSGALAMGMDGVNNAVIPGKAEPEDYVAEITR ANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVHRSGSYVLPMPEGKDVKKALYRVLRQKSMREKIRI ENRVMPVRILTEALGEGGDGGQQRRAVGAAGFNTRTGEFVTVGAKAVILATGPCGRLGLPASGYLYGTYENPTNAGDGYA MAYHAGAELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFVDSDYWSGQMMTEVKNEIESARGPIYLKVTHL PEETLSALENILHTTERPTRGTFHANRGHDYRTHDIEMHISEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNY MIGAFVYGDLAGEHAASILSKTPAPLELPVDQLKEAHELIYRPLRHPDGPPQPQVEYKLRRFVNDYVAPPKTAAKLSLAV QTFERMAEEVGQIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPDRDDDNWRYHLNLRKSGDGMD FVKRPVAPYFVPVPGLDDLPSGETAPIAVHQPELLGAKAPATRVTTAITMDAEQPPSPRIAAVLALEAPTVQDLLQYLTD DDPGVRRTAIASLTEHIPVGYEAALLDALSDNDSSVRRTAAEGLRELVEMLENPAAIRGYVGAPDPLVRSTALYVASARR VGDPVAYVVSLRDPDHRVRIEAVRALVSVDDAGSVATAATDENREVRIAVANGLAKLSAGGEAVRALVHDGDPLVRAAAL TALGELGVDDEILHAVEQALKAPAWQIRQGAVRALAGASPGQAVSALVRALADTHLDVRKSAVLSLSRWVSTEPAVREAL TGALQDGDADVRAYARQALASV
Specific function: Catalyzes the oxidation of L-aspartate to iminoaspartate [H]
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786942, Length=440, Percent_Identity=23.8636363636364, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6322701, Length=580, Percent_Identity=25, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR015939 - InterPro: IPR004112 - InterPro: IPR005288 [H]
Pfam domain/function: PF00890 FAD_binding_2; PF02910 Succ_DH_flav_C [H]
EC number: =1.4.3.16 [H]
Molecular weight: Translated: 97283; Mature: 97283
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPELDSAIRLDCDVLVIGGGTAGTMAALTAAENGAQVLLLEKAHVRHSGALAMGMDGV CCCCCCCCEEEECCEEEEECCCCCHHHHHHHCCCCCCEEEEEEHHHHCCCCCEEECCCCC NNAVIPGKAEPEDYVAEITRANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEY CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AVRRVHRSGSYVLPMPEGKDVKKALYRVLRQKSMREKIRIENRVMPVRILTEALGEGGDG HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GQQRRAVGAAGFNTRTGEFVTVGAKAVILATGPCGRLGLPASGYLYGTYENPTNAGDGYA CHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEE MAYHAGAELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFVDSDYWSGQMMT EEEECCCCCCCEEEEEECCHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHH EVKNEIESARGPIYLKVTHLPEETLSALENILHTTERPTRGTFHANRGHDYRTHDIEMHI HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEH SEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNYMIGAFVYGDLAGEHAASILS HHHCEECCCCCCCCEECCCCCCCCCCCEECCCEEECCCCCEEEEEEEECHHHHHHHHHHH KTPAPLELPVDQLKEAHELIYRPLRHPDGPPQPQVEYKLRRFVNDYVAPPKTAAKLSLAV CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH QTFERMAEEVGQIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RDDDNWRYHLNLRKSGDGMDFVKRPVAPYFVPVPGLDDLPSGETAPIAVHQPELLGAKAP CCCCCEEEEEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCHHCCCCCC ATRVTTAITMDAEQPPSPRIAAVLALEAPTVQDLLQYLTDDDPGVRRTAIASLTEHIPVG CCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC YEAALLDALSDNDSSVRRTAAEGLRELVEMLENPAAIRGYVGAPDPLVRSTALYVASARR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHH VGDPVAYVVSLRDPDHRVRIEAVRALVSVDDAGSVATAATDENREVRIAVANGLAKLSAG CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCHHHHCCC GEAVRALVHDGDPLVRAAALTALGELGVDDEILHAVEQALKAPAWQIRQGAVRALAGASP HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GQAVSALVRALADTHLDVRKSAVLSLSRWVSTEPAVREALTGALQDGDADVRAYARQALA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH SV CC >Mature Secondary Structure METPELDSAIRLDCDVLVIGGGTAGTMAALTAAENGAQVLLLEKAHVRHSGALAMGMDGV CCCCCCCCEEEECCEEEEECCCCCHHHHHHHCCCCCCEEEEEEHHHHCCCCCEEECCCCC NNAVIPGKAEPEDYVAEITRANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEY CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AVRRVHRSGSYVLPMPEGKDVKKALYRVLRQKSMREKIRIENRVMPVRILTEALGEGGDG HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC GQQRRAVGAAGFNTRTGEFVTVGAKAVILATGPCGRLGLPASGYLYGTYENPTNAGDGYA CHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEE MAYHAGAELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFVDSDYWSGQMMT EEEECCCCCCCEEEEEECCHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHH EVKNEIESARGPIYLKVTHLPEETLSALENILHTTERPTRGTFHANRGHDYRTHDIEMHI HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEH SEIGLCSGHSASGVWVDEHARTTVPGLYAAGDLACVPHNYMIGAFVYGDLAGEHAASILS HHHCEECCCCCCCCEECCCCCCCCCCCEECCCEEECCCCCEEEEEEEECHHHHHHHHHHH KTPAPLELPVDQLKEAHELIYRPLRHPDGPPQPQVEYKLRRFVNDYVAPPKTAAKLSLAV CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH QTFERMAEEVGQIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGLYHDRADLPD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RDDDNWRYHLNLRKSGDGMDFVKRPVAPYFVPVPGLDDLPSGETAPIAVHQPELLGAKAP CCCCCEEEEEEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCHHCCCCCC ATRVTTAITMDAEQPPSPRIAAVLALEAPTVQDLLQYLTDDDPGVRRTAIASLTEHIPVG CCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC YEAALLDALSDNDSSVRRTAAEGLRELVEMLENPAAIRGYVGAPDPLVRSTALYVASARR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHH VGDPVAYVVSLRDPDHRVRIEAVRALVSVDDAGSVATAATDENREVRIAVANGLAKLSAG CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCHHHHCCC GEAVRALVHDGDPLVRAAALTALGELGVDDEILHAVEQALKAPAWQIRQGAVRALAGASP HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GQAVSALVRALADTHLDVRKSAVLSLSRWVSTEPAVREALTGALQDGDADVRAYARQALA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH SV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7737518; 10984043; 7961421 [H]