Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629299
Identifier: 169629299
GI number: 169629299
Start: 2237095
End: 2237886
Strand: Direct
Name: 169629299
Synonym: MAB_2213
Alternate gene names: NA
Gene position: 2237095-2237886 (Clockwise)
Preceding gene: 169629298
Following gene: 169629301
Centisome position: 44.15
GC content: 64.14
Gene sequence:
>792_bases GTGACTGTTATCCAGCCCCCTGCTCCGCTTGAATGCTGGTGGTGGCCAAGGCCCTATCAGCAGTCTCTGCCCACGGTGCT GTTTTTCCCGGGTGCCGGGGCGAACCACGCCGGCGAGCAGCACCTCGTCCCATATCTGGCGGGCGTCAACTTCGGGGTCT GGCGAATGCCGGGGCGCAGCACGCGATCGCAGGAACCGCCCCCGGAGAAACTTCGGGTACTTGCCGATGAGTGCGCGTCG GCGATTATCGGACTCGGCTGCCGTCGACCGGTGCTGGCGGGCAAGAGCTTTGGTGGCTTGTTCGGATATGCGGTATGCCA GGCGCTCCAGGCGCGGGACTTCGAAGTGGGCCGGTTCATTCCGGTGGTGAGTGGGCATCCGTCGCTGTGGCGAATGGACG CGTTATACGCCAAGACCCGGGGGCACAGCCCGCAACAGCATGCGCTCTGGAGACTCACCAACGACGAGCAACGCGGGGCG TGGCCACCGAAGAAGATAGCGGACGAATCATTGCTGGCGCAGGCGCGGCTACACGCGGTGATCGATTTCAGCCTTGGCCT GCAATCGATTTCACGGCGCCGGATCACCACACCCATCACCGAGGTGAGCGCCAAGGACGACGAGGTGCTCCCCAAGTTCG CACCACCACGCCGCTGGGCCCCCTACACCCAAGGGGAATTCACCAGCATCCTCGTCACGGGAGGACACTACTTCTACTGG GCCAACCCGCAGGCCCTCTCGACCATCTTGACCCATGAAGCCGAGTTCGCCCTCAGCGGCTCGTTCTCGTAG
Upstream 100 bases:
>100_bases GTTCACCCCGGACCTCACCCTCGAGGCGGTGGGTGCCCGGGTGGCACTACTTATCGCTCAAGGGGTCGGCGATCCCGATC ACGACGGGATATAACTGGTT
Downstream 100 bases:
>100_bases CCGCCGGGGACGCGTCATGTACCGGCTACGGGTTTTCGCGTTGGCAATCCGGTCCGGTGTATTGCCAGTTCGGGTTGCTT GAGTATTGGCAGCCCGGGCC
Product: putative thioesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTVIQPPAPLECWWWPRPYQQSLPTVLFFPGAGANHAGEQHLVPYLAGVNFGVWRMPGRSTRSQEPPPEKLRVLADECAS AIIGLGCRRPVLAGKSFGGLFGYAVCQALQARDFEVGRFIPVVSGHPSLWRMDALYAKTRGHSPQQHALWRLTNDEQRGA WPPKKIADESLLAQARLHAVIDFSLGLQSISRRRITTPITEVSAKDDEVLPKFAPPRRWAPYTQGEFTSILVTGGHYFYW ANPQALSTILTHEAEFALSGSFS
Sequences:
>Translated_263_residues MTVIQPPAPLECWWWPRPYQQSLPTVLFFPGAGANHAGEQHLVPYLAGVNFGVWRMPGRSTRSQEPPPEKLRVLADECAS AIIGLGCRRPVLAGKSFGGLFGYAVCQALQARDFEVGRFIPVVSGHPSLWRMDALYAKTRGHSPQQHALWRLTNDEQRGA WPPKKIADESLLAQARLHAVIDFSLGLQSISRRRITTPITEVSAKDDEVLPKFAPPRRWAPYTQGEFTSILVTGGHYFYW ANPQALSTILTHEAEFALSGSFS >Mature_262_residues TVIQPPAPLECWWWPRPYQQSLPTVLFFPGAGANHAGEQHLVPYLAGVNFGVWRMPGRSTRSQEPPPEKLRVLADECASA IIGLGCRRPVLAGKSFGGLFGYAVCQALQARDFEVGRFIPVVSGHPSLWRMDALYAKTRGHSPQQHALWRLTNDEQRGAW PPKKIADESLLAQARLHAVIDFSLGLQSISRRRITTPITEVSAKDDEVLPKFAPPRRWAPYTQGEFTSILVTGGHYFYWA NPQALSTILTHEAEFALSGSFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29258; Mature: 29127
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIQPPAPLECWWWPRPYQQSLPTVLFFPGAGANHAGEQHLVPYLAGVNFGVWRMPGRS CCCCCCCCCCEEEECCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCCC TRSQEPPPEKLRVLADECASAIIGLGCRRPVLAGKSFGGLFGYAVCQALQARDFEVGRFI CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE PVVSGHPSLWRMDALYAKTRGHSPQQHALWRLTNDEQRGAWPPKKIADESLLAQARLHAV EEECCCCCHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH IDFSLGLQSISRRRITTPITEVSAKDDEVLPKFAPPRRWAPYTQGEFTSILVTGGHYFYW HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE ANPQALSTILTHEAEFALSGSFS ECHHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure TVIQPPAPLECWWWPRPYQQSLPTVLFFPGAGANHAGEQHLVPYLAGVNFGVWRMPGRS CCCCCCCCCEEEECCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCCC TRSQEPPPEKLRVLADECASAIIGLGCRRPVLAGKSFGGLFGYAVCQALQARDFEVGRFI CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE PVVSGHPSLWRMDALYAKTRGHSPQQHALWRLTNDEQRGAWPPKKIADESLLAQARLHAV EEECCCCCHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH IDFSLGLQSISRRRITTPITEVSAKDDEVLPKFAPPRRWAPYTQGEFTSILVTGGHYFYW HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE ANPQALSTILTHEAEFALSGSFS ECHHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA