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The map label for this gene is mmpS4 [H]

Identifier: 169629297

GI number: 169629297

Start: 2230099

End: 2230497

Strand: Reverse

Name: mmpS4 [H]

Synonym: MAB_2211c

Alternate gene names: 169629297

Gene position: 2230497-2230099 (Counterclockwise)

Preceding gene: 169629300

Following gene: 169629296

Centisome position: 44.02

GC content: 65.91

Gene sequence:

>399_bases
GTGTATCTTGTTGTGCTGGCAGTGCTTACCGTCGCGGCGCTGTTCATCCTCAAACTGCGTGCGAGCGATATCCCCGACGA
GGCGGCCGGGACGGTCAGCCGCCTCCCCACGCTGGGCAGCCTTTCTGAACGGACCATCCAATACGAGGCCGTCGGCCCCG
CCGGGACTCCGGCGACGGTGTCCTACCTGGACGACGACGGCCACAACCAGAACGTCGACACGGTCCTGCCCTGGCAGGAG
GCGCTACGCACCGTGGAGCCGTCCCTGGTGACCAGCATGGTCGTACAGTCCAACAGCTCGGGAGTCGGATGCCGGATCAC
CGTCGATGGGAAGGTCCGGGACGAGCAAGTCGCCACCGCCAGCGGAGGCATCGCCAGCTGCAAGGTGCAAGTCGCATGA

Upstream 100 bases:

>100_bases
CTGTGGAATTCGCACTGTACGCGCATGATTGGCAACACGAAGGGTGTTTCACAATGACTTTGCCGCTTCCCTCAAAGGCC
AATCAATGAGAAACACTTGG

Downstream 100 bases:

>100_bases
AGAAGAAGGACGAGAGCGAAGCAGATACCGGCCCGATAGCGGCTCCCGTTGGCGCCGAGACATTCTCGGCTCGATCACGG
GCATTCGGTAGGCGGGTACG

Product: putative membrane protein, MmpS

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MYLVVLAVLTVAALFILKLRASDIPDEAAGTVSRLPTLGSLSERTIQYEAVGPAGTPATVSYLDDDGHNQNVDTVLPWQE
ALRTVEPSLVTSMVVQSNSSGVGCRITVDGKVRDEQVATASGGIASCKVQVA

Sequences:

>Translated_132_residues
MYLVVLAVLTVAALFILKLRASDIPDEAAGTVSRLPTLGSLSERTIQYEAVGPAGTPATVSYLDDDGHNQNVDTVLPWQE
ALRTVEPSLVTSMVVQSNSSGVGCRITVDGKVRDEQVATASGGIASCKVQVA
>Mature_132_residues
MYLVVLAVLTVAALFILKLRASDIPDEAAGTVSRLPTLGSLSERTIQYEAVGPAGTPATVSYLDDDGHNQNVDTVLPWQE
ALRTVEPSLVTSMVVQSNSSGVGCRITVDGKVRDEQVATASGGIASCKVQVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 13801; Mature: 13801

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVVLAVLTVAALFILKLRASDIPDEAAGTVSRLPTLGSLSERTIQYEAVGPAGTPATV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
SYLDDDGHNQNVDTVLPWQEALRTVEPSLVTSMVVQSNSSGVGCRITVDGKVRDEQVATA
EEECCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEC
SGGIASCKVQVA
CCCEEEEEEEEC
>Mature Secondary Structure
MYLVVLAVLTVAALFILKLRASDIPDEAAGTVSRLPTLGSLSERTIQYEAVGPAGTPATV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
SYLDDDGHNQNVDTVLPWQEALRTVEPSLVTSMVVQSNSSGVGCRITVDGKVRDEQVATA
EEECCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEC
SGGIASCKVQVA
CCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]