Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629276
Identifier: 169629276
GI number: 169629276
Start: 2205496
End: 2206311
Strand: Direct
Name: 169629276
Synonym: MAB_2190
Alternate gene names: NA
Gene position: 2205496-2206311 (Clockwise)
Preceding gene: 169629275
Following gene: 169629278
Centisome position: 43.53
GC content: 64.46
Gene sequence:
>816_bases GTGGCGTCGTTGCCGTTGATGGCACATAAGGTCGAGCAAACGCTAAGGTGGAGCGTCAGCACGCTCTTACACACCGGTAA GAAACAAGGTCGCGACACGGGAGGAACGATGAGCGGTCCACAGGGAACGGAACCCGGCGGACAGTGGGCGCCGCAACCTG GGCAAGGCCAAGATCCCTGGCAGACACCGCAATCGTCAGATCCGGCGCAGCAGGGTGAGCAGGGCTGGCAGCAGCCGGCC TACGGACAGGGACAGCAGTACCCGCAGTACCAGCAGCCCGGTTTCCCGGGCGGTGGTTTTGGGGATCCGAGCCAGTTCGG TCAGCAGCCCGGCCAGGGATTCGGCGAGCCGAGCCAGTTCGGGCAGCCCGGTGCCTACGGCCAACAGGGACAGTACGGAC AGCAGGGTGCCTACCCCGGGCAGTACGGGCAGCCGCAGGGACAGCCGTTCCCTCAGTTCGGCGCCGGTAAGCCGCAGCGG TCCACCAAGACCATCGCGATCATCGGCGGTATCGTCGCCGCGGCGGTGGTCTTGATCGTGTTGCTGGTCACCGCGTTCCT GGCTCCCGGCTGGGCGGTCACCACCACCCTGGACGTGAACAAGGCCCAGGACGGTGTGACGAAGATCCTGACCGACGAGA CCAACGGTTACGGCGCCAAGAACGTCAAGGACGTCAAGTGCAATGACGGCAACAACCCCGAGGTGAAGAAGGGCGCAACC TTCACCTGCGACGTCAGCATCGATGGCACCAAGCGTCAGGTCACCGTGACGTTCCAGAACGACAAGGGCACCTACGAGGT CGGTCGCCCCAAGTAA
Upstream 100 bases:
>100_bases TGGTGCCGACAAGTGGTGGATCTGCTCGACCAGATTCACAAGGCCGCGCCGGATGCCGAGGTGCGTTCGGCGGCGAAGGC GGCGGTCGGTGACGTGCGGC
Downstream 100 bases:
>100_bases TCGGTTCCCTCCTCAACAACGCCGAGTGTGCAGATCCGCACACTCGGCGTTGTTTGTACTACCGGGGCAGGCCGTCAAGC GCCTTTTGCAGACGGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGTMSGPQGTEPGGQWAPQPGQGQDPWQTPQSSDPAQQGEQGWQQPA YGQGQQYPQYQQPGFPGGGFGDPSQFGQQPGQGFGEPSQFGQPGAYGQQGQYGQQGAYPGQYGQPQGQPFPQFGAGKPQR STKTIAIIGGIVAAAVVLIVLLVTAFLAPGWAVTTTLDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGAT FTCDVSIDGTKRQVTVTFQNDKGTYEVGRPK
Sequences:
>Translated_271_residues MASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGTMSGPQGTEPGGQWAPQPGQGQDPWQTPQSSDPAQQGEQGWQQPA YGQGQQYPQYQQPGFPGGGFGDPSQFGQQPGQGFGEPSQFGQPGAYGQQGQYGQQGAYPGQYGQPQGQPFPQFGAGKPQR STKTIAIIGGIVAAAVVLIVLLVTAFLAPGWAVTTTLDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGAT FTCDVSIDGTKRQVTVTFQNDKGTYEVGRPK >Mature_270_residues ASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGTMSGPQGTEPGGQWAPQPGQGQDPWQTPQSSDPAQQGEQGWQQPAY GQGQQYPQYQQPGFPGGGFGDPSQFGQQPGQGFGEPSQFGQPGAYGQQGQYGQQGAYPGQYGQPQGQPFPQFGAGKPQRS TKTIAIIGGIVAAAVVLIVLLVTAFLAPGWAVTTTLDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGATF TCDVSIDGTKRQVTVTFQNDKGTYEVGRPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28671; Mature: 28540
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGTMSGPQGTEPGGQWAPQPGQGQDPW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPQSSDPAQQGEQGWQQPAYGQGQQYPQYQQPGFPGGGFGDPSQFGQQPGQGFGEPSQF CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHC GQPGAYGQQGQYGQQGAYPGQYGQPQGQPFPQFGAGKPQRSTKTIAIIGGIVAAAVVLIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH LLVTAFLAPGWAVTTTLDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGAT HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCE FTCDVSIDGTKRQVTVTFQNDKGTYEVGRPK EEEEEEECCCCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure ASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGTMSGPQGTEPGGQWAPQPGQGQDPW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPQSSDPAQQGEQGWQQPAYGQGQQYPQYQQPGFPGGGFGDPSQFGQQPGQGFGEPSQF CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHC GQPGAYGQQGQYGQQGAYPGQYGQPQGQPFPQFGAGKPQRSTKTIAIIGGIVAAAVVLIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH LLVTAFLAPGWAVTTTLDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGAT HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCE FTCDVSIDGTKRQVTVTFQNDKGTYEVGRPK EEEEEEECCCCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]