Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is tatC [H]
Identifier: 169629274
GI number: 169629274
Start: 2201792
End: 2202733
Strand: Direct
Name: tatC [H]
Synonym: MAB_2188
Alternate gene names: 169629274
Gene position: 2201792-2202733 (Clockwise)
Preceding gene: 169629273
Following gene: 169629275
Centisome position: 43.45
GC content: 61.68
Gene sequence:
>942_bases ATGAACAAAGTTCTGGGTGCTCTTCGGCTGCCTGGACGTCCTCGACAACCCAAAAATCCCGACGGCACCATGTCGCTCGT CGAGCATCTGCAGGAACTGCGTACCCGCCTGCTCATTTCGGTGGCGGCCGTCCTGCTGACCACGATCGTCGGTTTTGTCT GGTACGAGCACACGTTGTTCGGCATCGAGAGTCTCGGTGAGTGGTTGCGTGAACCGTACTGCTCATTGCCGGCGAGTGCG CGGGCCAATCTGAGTGTCGACGGCGCCTGCCGGCTTTTGGCCACGGCGCCTTTCGAACAGTTCATGTTGCGCCTCAAGGT CGGGCTGACGGCCGGCGTGGTGCTGGCCTGCCCGGTGTGGCTGTACCAGATCTGGCGATTTATCACCCCCGGTCTGTACC GCAACGAACGCAAGTTCGCGATCATCTTCGTGACCGCGGCGGCGGTGCTGTTCGTCGCCGGCGCGTTGTTGGCCTACCTG GTACTGGCCAAGGCCCTGCACTTCCTGCTCACGGTGGGTAGCGATGTGCAAGTCACCGGGCTCAAGGGTGACGAGTACTT CAGCTTCCTGATCAACCTGCTGCTGGTCTTCGGCGTCAGCTTCGAGTTTCCGTTGCTGATCGTCATGCTGAACTTCGTCG GGATTCTGTCCTACGACAAGCTCAGAAACTGGCGCCGGGGTCTGATCTTCGGTCTCTTCGTTTTCGCCGCTTTCGCGACG CCGGGATCCGATCCGTTCTCCATGACCGCGCTGGGACTCGCGCTCACGTTGTTGTTGGAGTTCTCCATCCAGGTCTCCCG GGTGCATGACAAACGCAAGGCCAAGCGCGAGGCGGCGCAGCAGCTCAGCGATGACGAGGCTTCTACGCTCGACGCGCCCG AGGCCATCGACGCACCCGAACCGATCGGGCCCGCCGAGCGGTTCGACAATAGGGGCAAGTGA
Upstream 100 bases:
>100_bases CGCGGTGGAAGCGCCCCCCATCGAATCGACTCCCGGCCACAAGCCCACCGCCTAGCCGCGTCCCGCCGCGGGATAGGCCG GCCGGACAGGTCATGCGTTT
Downstream 100 bases:
>100_bases TGAGCCTCTTGAGCGAAGAACGTTGACCACAGTCCCGCCGCCGCAGTTGCGCGCGTTCTCCGAGGGGCTGAGCTTCGCGC TCGATCCGTTTCAGGTGCGC
Product: Sec-independent protein translocase protein TatC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNKVLGALRLPGRPRQPKNPDGTMSLVEHLQELRTRLLISVAAVLLTTIVGFVWYEHTLFGIESLGEWLREPYCSLPASA RANLSVDGACRLLATAPFEQFMLRLKVGLTAGVVLACPVWLYQIWRFITPGLYRNERKFAIIFVTAAAVLFVAGALLAYL VLAKALHFLLTVGSDVQVTGLKGDEYFSFLINLLLVFGVSFEFPLLIVMLNFVGILSYDKLRNWRRGLIFGLFVFAAFAT PGSDPFSMTALGLALTLLLEFSIQVSRVHDKRKAKREAAQQLSDDEASTLDAPEAIDAPEPIGPAERFDNRGK
Sequences:
>Translated_313_residues MNKVLGALRLPGRPRQPKNPDGTMSLVEHLQELRTRLLISVAAVLLTTIVGFVWYEHTLFGIESLGEWLREPYCSLPASA RANLSVDGACRLLATAPFEQFMLRLKVGLTAGVVLACPVWLYQIWRFITPGLYRNERKFAIIFVTAAAVLFVAGALLAYL VLAKALHFLLTVGSDVQVTGLKGDEYFSFLINLLLVFGVSFEFPLLIVMLNFVGILSYDKLRNWRRGLIFGLFVFAAFAT PGSDPFSMTALGLALTLLLEFSIQVSRVHDKRKAKREAAQQLSDDEASTLDAPEAIDAPEPIGPAERFDNRGK >Mature_313_residues MNKVLGALRLPGRPRQPKNPDGTMSLVEHLQELRTRLLISVAAVLLTTIVGFVWYEHTLFGIESLGEWLREPYCSLPASA RANLSVDGACRLLATAPFEQFMLRLKVGLTAGVVLACPVWLYQIWRFITPGLYRNERKFAIIFVTAAAVLFVAGALLAYL VLAKALHFLLTVGSDVQVTGLKGDEYFSFLINLLLVFGVSFEFPLLIVMLNFVGILSYDKLRNWRRGLIFGLFVFAAFAT PGSDPFSMTALGLALTLLLEFSIQVSRVHDKRKAKREAAQQLSDDEASTLDAPEAIDAPEPIGPAERFDNRGK
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=276, Percent_Identity=30.7971014492754, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 34660; Mature: 34660
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVLGALRLPGRPRQPKNPDGTMSLVEHLQELRTRLLISVAAVLLTTIVGFVWYEHTLF CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIESLGEWLREPYCSLPASARANLSVDGACRLLATAPFEQFMLRLKVGLTAGVVLACPVW HHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LYQIWRFITPGLYRNERKFAIIFVTAAAVLFVAGALLAYLVLAKALHFLLTVGSDVQVTG HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC LKGDEYFSFLINLLLVFGVSFEFPLLIVMLNFVGILSYDKLRNWRRGLIFGLFVFAAFAT CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGSDPFSMTALGLALTLLLEFSIQVSRVHDKRKAKREAAQQLSDDEASTLDAPEAIDAPE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC PIGPAERFDNRGK CCCCHHHCCCCCC >Mature Secondary Structure MNKVLGALRLPGRPRQPKNPDGTMSLVEHLQELRTRLLISVAAVLLTTIVGFVWYEHTLF CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIESLGEWLREPYCSLPASARANLSVDGACRLLATAPFEQFMLRLKVGLTAGVVLACPVW HHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LYQIWRFITPGLYRNERKFAIIFVTAAAVLFVAGALLAYLVLAKALHFLLTVGSDVQVTG HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC LKGDEYFSFLINLLLVFGVSFEFPLLIVMLNFVGILSYDKLRNWRRGLIFGLFVFAAFAT CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGSDPFSMTALGLALTLLLEFSIQVSRVHDKRKAKREAAQQLSDDEASTLDAPEAIDAPE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC PIGPAERFDNRGK CCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]