Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629261
Identifier: 169629261
GI number: 169629261
Start: 2188817
End: 2190016
Strand: Direct
Name: 169629261
Synonym: MAB_2175
Alternate gene names: NA
Gene position: 2188817-2190016 (Clockwise)
Preceding gene: 169629260
Following gene: 169629262
Centisome position: 43.2
GC content: 65.58
Gene sequence:
>1200_bases GTGACGCAGACCGTACGACCCGACGAATGGCACAGCGATAAGTGGAGCCATGAGTCGATCATGGACATGCAGGCGCGCAT GGCGCCGGATGACATCCGGCGTATCGCCGACGAATGGAAAGTCACCCTGCGGGCGTTGGATGCACTGTTGGCAGGCTTTC TTGAGGATGTGACGGCGACGATCGGGGACGGTTGGAGCGGCCCCGGGGCACGGGCGGCGCTGAGCACCATGCGCGAATAC GTTGAAAATTCGCGTACCGCTCTCGATACGGCGTTCACGCTATCTTCCGGCCTCGATGTGCTGGCCCAGGCGACGAGCGA GCTACAGCAGAAGATCGCACCCCCGCCTGTCCCGGTGCCGGCCTACAAGTTGGGTGAAATCCCGCGCTGGGGCACTCCGT TTGCCGAGCAGTTGGCCCTGTGGGAGCAGGCCGTGAACCAGGTAGAGACCGTGTACAGCGCTCCGGCGATACGGGCTGCT CATGCCGTCGCCGAGCTGATCGGCCCCCGGGAAAGCCTGCGTTTCGGCTCCGGGCCGGACGCGGACGTCGCGGTGGCGGG CCGGCGCATACCAGACGAACAGGCCGAGCGAGCCGAAGAATTTCTGGCGCGCTGGGGTCTCGGTGAGAGCGAGGGGAATC CGCCGCAGGGGACGTCCCCGAACAACGTCGGCACGCCACCCCAAATACCGGTCATGGTTCCGGTGATGGCGGGTAATCCT TTCTCAGGTAAAGGCTTTGGGATCGGATCGGCGCCAGGATCCAGGGGCGACGAACTCGGCGAAGACGATGTCTACGCGAG TCAGAACTGGATGCGTGATCCCCTTGGGCGCGAGAATCCCACCCGCAGTGCCGGAATCGAATCTGCGGTGCCCGGCCTGC GGGGAGCCTTGTCTCCCGACCGGATTCCGGGGTTCGGCACCGGAGCACATGTGGCAGGTCCCGGTGGTATCGGTGGTGCT GCGGCGAACCGGTCCTGGGGCGCGATGATGCCGATGATGGGTACGTATCCAGCGCATGCAGGCCAGCGGCGGGGTGACGA GAACGAGCACTACAGTCCGCCATACCTGGTGAACGCGGACAATACGCGCGAGCTGCTCGGGGACCTGCCCAAGGGGTGGG CCCCGGTCATCGGCCTGTGGGAGAGCGACAGCGACGAAGAATTCGGCCCAACGCCGCGGCGCGGGTTTCGTTCGCGCTGA
Upstream 100 bases:
>100_bases CGGTGCTGACCGAGTTCGCCGAGACCTTCCGGCGCATCGGGGACGCCTATGCGCAGGTTGACGCGGGTTCTGCCGGCAAC TCTCGCGACGAGGTGGCGCG
Downstream 100 bases:
>100_bases GTCGGACCCTTGAGGGTGCGGGTTTGCGCCGGTATCAATACCGGGTGCCTTCGACGCTATCTGCTGATTGCTGCTGTTGT CTGACGCCGTTCCCTAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTQTVRPDEWHSDKWSHESIMDMQARMAPDDIRRIADEWKVTLRALDALLAGFLEDVTATIGDGWSGPGARAALSTMREY VENSRTALDTAFTLSSGLDVLAQATSELQQKIAPPPVPVPAYKLGEIPRWGTPFAEQLALWEQAVNQVETVYSAPAIRAA HAVAELIGPRESLRFGSGPDADVAVAGRRIPDEQAERAEEFLARWGLGESEGNPPQGTSPNNVGTPPQIPVMVPVMAGNP FSGKGFGIGSAPGSRGDELGEDDVYASQNWMRDPLGRENPTRSAGIESAVPGLRGALSPDRIPGFGTGAHVAGPGGIGGA AANRSWGAMMPMMGTYPAHAGQRRGDENEHYSPPYLVNADNTRELLGDLPKGWAPVIGLWESDSDEEFGPTPRRGFRSR
Sequences:
>Translated_399_residues MTQTVRPDEWHSDKWSHESIMDMQARMAPDDIRRIADEWKVTLRALDALLAGFLEDVTATIGDGWSGPGARAALSTMREY VENSRTALDTAFTLSSGLDVLAQATSELQQKIAPPPVPVPAYKLGEIPRWGTPFAEQLALWEQAVNQVETVYSAPAIRAA HAVAELIGPRESLRFGSGPDADVAVAGRRIPDEQAERAEEFLARWGLGESEGNPPQGTSPNNVGTPPQIPVMVPVMAGNP FSGKGFGIGSAPGSRGDELGEDDVYASQNWMRDPLGRENPTRSAGIESAVPGLRGALSPDRIPGFGTGAHVAGPGGIGGA AANRSWGAMMPMMGTYPAHAGQRRGDENEHYSPPYLVNADNTRELLGDLPKGWAPVIGLWESDSDEEFGPTPRRGFRSR >Mature_398_residues TQTVRPDEWHSDKWSHESIMDMQARMAPDDIRRIADEWKVTLRALDALLAGFLEDVTATIGDGWSGPGARAALSTMREYV ENSRTALDTAFTLSSGLDVLAQATSELQQKIAPPPVPVPAYKLGEIPRWGTPFAEQLALWEQAVNQVETVYSAPAIRAAH AVAELIGPRESLRFGSGPDADVAVAGRRIPDEQAERAEEFLARWGLGESEGNPPQGTSPNNVGTPPQIPVMVPVMAGNPF SGKGFGIGSAPGSRGDELGEDDVYASQNWMRDPLGRENPTRSAGIESAVPGLRGALSPDRIPGFGTGAHVAGPGGIGGAA ANRSWGAMMPMMGTYPAHAGQRRGDENEHYSPPYLVNADNTRELLGDLPKGWAPVIGLWESDSDEEFGPTPRRGFRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42751; Mature: 42620
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTVRPDEWHSDKWSHESIMDMQARMAPDDIRRIADEWKVTLRALDALLAGFLEDVTAT CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGDGWSGPGARAALSTMREYVENSRTALDTAFTLSSGLDVLAQATSELQQKIAPPPVPVP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AYKLGEIPRWGTPFAEQLALWEQAVNQVETVYSAPAIRAAHAVAELIGPRESLRFGSGPD CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCC ADVAVAGRRIPDEQAERAEEFLARWGLGESEGNPPQGTSPNNVGTPPQIPVMVPVMAGNP CCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC FSGKGFGIGSAPGSRGDELGEDDVYASQNWMRDPLGRENPTRSAGIESAVPGLRGALSPD CCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCCCHHCCHHHHCCHHHCCCCCC RIPGFGTGAHVAGPGGIGGAAANRSWGAMMPMMGTYPAHAGQRRGDENEHYSPPYLVNAD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCCCCCCCCCCCCCCCCCCCCCEEECCC NTRELLGDLPKGWAPVIGLWESDSDEEFGPTPRRGFRSR CHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQTVRPDEWHSDKWSHESIMDMQARMAPDDIRRIADEWKVTLRALDALLAGFLEDVTAT CCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGDGWSGPGARAALSTMREYVENSRTALDTAFTLSSGLDVLAQATSELQQKIAPPPVPVP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AYKLGEIPRWGTPFAEQLALWEQAVNQVETVYSAPAIRAAHAVAELIGPRESLRFGSGPD CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCC ADVAVAGRRIPDEQAERAEEFLARWGLGESEGNPPQGTSPNNVGTPPQIPVMVPVMAGNP CCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC FSGKGFGIGSAPGSRGDELGEDDVYASQNWMRDPLGRENPTRSAGIESAVPGLRGALSPD CCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCCCHHCCHHHHCCHHHCCCCCC RIPGFGTGAHVAGPGGIGGAAANRSWGAMMPMMGTYPAHAGQRRGDENEHYSPPYLVNAD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCCCCCCCCCCCCCCCCCCCCCEEECCC NTRELLGDLPKGWAPVIGLWESDSDEEFGPTPRRGFRSR CHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA