Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629196
Identifier: 169629196
GI number: 169629196
Start: 2109463
End: 2110050
Strand: Direct
Name: 169629196
Synonym: MAB_2110
Alternate gene names: NA
Gene position: 2109463-2110050 (Clockwise)
Preceding gene: 169629195
Following gene: 169629197
Centisome position: 41.63
GC content: 63.78
Gene sequence:
>588_bases ATGCCGCGATCGATTCACGTATTCCGCAGCCCGGACCGTTTCGTCGCCGGGACAGTCGGGGAGCCGGGGAACCGTACCTT CTACCTGCAGGCTGTCCACGAAACCCGGATCGTCACTGTGATGCTGGAAAAGCAGCAGGTGTCGGTGCTCGCCGAACGCA TCGGAACACTGCTGTCTGAGGTCCATCGTCGATTCGGAACGCCAATTCCGCCCGAGCCGGACGTGGTCGACGATCTCAAT CCGTTGGTGATGCCCGTAGATGCGGAGTTTCGTGTCGGCACGATGGGCCTGGGCTGGGATGCCGAGGCCAATTCGGTGGT TGTCGAACTCCTCGCGGTCAGCGAGCAGGAGTTCGACGCCTCGGTGGTGCTGGATGACTCCGAGGAGGGCCCGGACGCGG TTCGGGTCTTTCTGTCTCTGGAGGCGGCGCGACAGTTCGCAACCCGCTCCACCAGGGTTGTATCGGCGGGCCGTCCTCCC TGTCCGCTATGCGAGGAACCGCTGGACCCGGCCGGGCACATCTGTGTCCGCACCAACGGCTATCGCCGCGGGATGGTGCC CGGGACAACAGATGACCCAGATTCCTAA
Upstream 100 bases:
>100_bases TCGAGCGCGCTGAGCGCCCGGCCGCCCGAGAAGTCCGCCGGGGATGCATCCGACGCGACAGTCGGCGGCACCACCGACTA GCGGTAGTTTTGGAGGCACC
Downstream 100 bases:
>100_bases CGGGAGTGCCGACACCGACCGTGCCGCGATCCGTGACAGTGAGCTCACCGTCATCGGTCGCATCCGGTCCGCGAGCAATG CCACGTTTCTCTGCGAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPRSIHVFRSPDRFVAGTVGEPGNRTFYLQAVHETRIVTVMLEKQQVSVLAERIGTLLSEVHRRFGTPIPPEPDVVDDLN PLVMPVDAEFRVGTMGLGWDAEANSVVVELLAVSEQEFDASVVLDDSEEGPDAVRVFLSLEAARQFATRSTRVVSAGRPP CPLCEEPLDPAGHICVRTNGYRRGMVPGTTDDPDS
Sequences:
>Translated_195_residues MPRSIHVFRSPDRFVAGTVGEPGNRTFYLQAVHETRIVTVMLEKQQVSVLAERIGTLLSEVHRRFGTPIPPEPDVVDDLN PLVMPVDAEFRVGTMGLGWDAEANSVVVELLAVSEQEFDASVVLDDSEEGPDAVRVFLSLEAARQFATRSTRVVSAGRPP CPLCEEPLDPAGHICVRTNGYRRGMVPGTTDDPDS >Mature_194_residues PRSIHVFRSPDRFVAGTVGEPGNRTFYLQAVHETRIVTVMLEKQQVSVLAERIGTLLSEVHRRFGTPIPPEPDVVDDLNP LVMPVDAEFRVGTMGLGWDAEANSVVVELLAVSEQEFDASVVLDDSEEGPDAVRVFLSLEAARQFATRSTRVVSAGRPPC PLCEEPLDPAGHICVRTNGYRRGMVPGTTDDPDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21323; Mature: 21192
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSIHVFRSPDRFVAGTVGEPGNRTFYLQAVHETRIVTVMLEKQQVSVLAERIGTLLSE CCCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHH VHRRFGTPIPPEPDVVDDLNPLVMPVDAEFRVGTMGLGWDAEANSVVVELLAVSEQEFDA HHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCE SVVLDDSEEGPDAVRVFLSLEAARQFATRSTRVVSAGRPPCPLCEEPLDPAGHICVRTNG EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECC YRRGMVPGTTDDPDS CCCCCCCCCCCCCCC >Mature Secondary Structure PRSIHVFRSPDRFVAGTVGEPGNRTFYLQAVHETRIVTVMLEKQQVSVLAERIGTLLSE CCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHH VHRRFGTPIPPEPDVVDDLNPLVMPVDAEFRVGTMGLGWDAEANSVVVELLAVSEQEFDA HHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCE SVVLDDSEEGPDAVRVFLSLEAARQFATRSTRVVSAGRPPCPLCEEPLDPAGHICVRTNG EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECC YRRGMVPGTTDDPDS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA