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The map label for this gene is ybcL [C]

Identifier: 169629189

GI number: 169629189

Start: 2104545

End: 2105066

Strand: Direct

Name: ybcL [C]

Synonym: MAB_2103

Alternate gene names: 169629189

Gene position: 2104545-2105066 (Clockwise)

Preceding gene: 169629188

Following gene: 169629193

Centisome position: 41.53

GC content: 68.01

Gene sequence:

>522_bases
ATGGCTTCCCCGTACGACGCTCTGCCGCAGTTGCCGACCTTCACCCTGACCTCCGCCAGCGTCACCGACGGTCAGCCGCT
GAGCCTGGACCAGGTCAGCGGGATCATGGGCGCTGGGGGACAGGATGTTTCGCCCGAGCTCAGCTGGTCCGGATTTCCGG
AGGAAACCCAGAGCTTCGCCGTCACCGTCTACGACCCGGATGCCCCGACCGCGTCTGGCTTCTGGCACTGGGCGGTGGCG
AACCTACCCGCCACGGTGACGCAGTTGCCCGCCGGAGTTGGTGACGGCAGCGGATTGCCCGGTGACGCCATCACTTTGGC
CAACGATGCCAGCCTCAAGCGGTACATCGGGGCCGCTCCGCCGGCCGGACACGGCCCGCACCGGTACTACATCGCGGTGC
ACGCGGTCAGCGTGCCGAAGCTGGAGCTGCCGGAGAACGCGACGCCGGCCTACCTGGGCTTCAACCTGTTCGGGCATGCG
ATCGCCCGCGCCGTCATCCACGGCACCTACGAGCAGCACTAG

Upstream 100 bases:

>100_bases
GTAGACGAGCGGGTACCGGTTGACGCACTGACGTTCGGCACCAAGGTTCTCCAGCATTTCCTGCTCAATCACTGACCGCA
CTCGAACGAAAGGACATCGC

Downstream 100 bases:

>100_bases
CTGCTCGTAGGTCAGGTGGCCGACCCGACGGCGTCCTGAAGGCTGGCGAAGCCGCCCGCCCGCAGGCGCTGGGCGATGCC
GTCGTGGATGCGTTTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MASPYDALPQLPTFTLTSASVTDGQPLSLDQVSGIMGAGGQDVSPELSWSGFPEETQSFAVTVYDPDAPTASGFWHWAVA
NLPATVTQLPAGVGDGSGLPGDAITLANDASLKRYIGAAPPAGHGPHRYYIAVHAVSVPKLELPENATPAYLGFNLFGHA
IARAVIHGTYEQH

Sequences:

>Translated_173_residues
MASPYDALPQLPTFTLTSASVTDGQPLSLDQVSGIMGAGGQDVSPELSWSGFPEETQSFAVTVYDPDAPTASGFWHWAVA
NLPATVTQLPAGVGDGSGLPGDAITLANDASLKRYIGAAPPAGHGPHRYYIAVHAVSVPKLELPENATPAYLGFNLFGHA
IARAVIHGTYEQH
>Mature_172_residues
ASPYDALPQLPTFTLTSASVTDGQPLSLDQVSGIMGAGGQDVSPELSWSGFPEETQSFAVTVYDPDAPTASGFWHWAVAN
LPATVTQLPAGVGDGSGLPGDAITLANDASLKRYIGAAPPAGHGPHRYYIAVHAVSVPKLELPENATPAYLGFNLFGHAI
ARAVIHGTYEQH

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=164, Percent_Identity=45.7317073170732, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1786990, Length=154, Percent_Identity=42.8571428571429, Blast_Score=123, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18008; Mature: 17877

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPYDALPQLPTFTLTSASVTDGQPLSLDQVSGIMGAGGQDVSPELSWSGFPEETQSFA
CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VTVYDPDAPTASGFWHWAVANLPATVTQLPAGVGDGSGLPGDAITLANDASLKRYIGAAP
EEEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCC
PAGHGPHRYYIAVHAVSVPKLELPENATPAYLGFNLFGHAIARAVIHGTYEQH
CCCCCCCEEEEEEEEEECCCEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASPYDALPQLPTFTLTSASVTDGQPLSLDQVSGIMGAGGQDVSPELSWSGFPEETQSFA
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VTVYDPDAPTASGFWHWAVANLPATVTQLPAGVGDGSGLPGDAITLANDASLKRYIGAAP
EEEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCC
PAGHGPHRYYIAVHAVSVPKLELPENATPAYLGFNLFGHAIARAVIHGTYEQH
CCCCCCCEEEEEEEEEECCCEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]