Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628921
Identifier: 169628921
GI number: 169628921
Start: 1834469
End: 1835095
Strand: Direct
Name: 169628921
Synonym: MAB_1833
Alternate gene names: NA
Gene position: 1834469-1835095 (Clockwise)
Preceding gene: 169628920
Following gene: 169628922
Centisome position: 36.2
GC content: 58.53
Gene sequence:
>627_bases GTGTTGCTTGCCGGACTGCTGATGGTGTTGGTGGGTTGCACGCAAGCACCCACTGCGACAACGGAACCTCCCGCGCCGCC GGACAGTAGCACCCTGACTCTGAGTGTTGCGGAAGTGCGTGAGATAACGCCGCCAGCACTCGAATCAGAACCCGACTTCG ACCTGCATAAGCCATACACCGACACGCAGCCTGATTTCGACATGTCCGTCGCGTGCCAAAAACTGTTCAACCAGGACCAG AAGTTCGGTGAGGGGTGGACGAACTTCCGCACCCTCACATATTCCGGGCCGAGCAACATTGGAATCAAGCAGAGCATCGC TGTATACCCAGACCGCAACGCAGCCCAATCGGTCTTCGGCGGAATCCAGGACAACCTGTCGGCTTGCCAGAAAAGCTATC CCGTCGCGCGTTACGGCGCTCCATACACGCTGAGCAAGTTAGCAGGCGATGACAAGACCGTTATGGCCCAGTACGCCGAC ACCGTCAACGGACCGGGCAGTGTCGAGCTGTATCGACTGGACGAGCAAGTGATCATCGATGTCAGCGCCGCCCACTTTTC CACCGACCCGCATGTGGCTGAAACCGTCCTGCAACGGATTCGAGAGAAACTGCGTTCTCGCGCGTGA
Upstream 100 bases:
>100_bases GGTACATGATCAATGCGCCTGAATCGGGAAAGCCTGTCAGGTTGGACAATGCGGACGAGGATAGCCGTATGACAGACGTG TTGAGGCTCAAGTGACGAGG
Downstream 100 bases:
>100_bases CCGCCAAGAGGTATGCCCAATGACGAAGCCGCAGCCCCAACTAGATCCGCCGCGGCTGGAGCTGGCCGCGGGCTTGTACG ATATGGCGGCCTGGCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLLAGLLMVLVGCTQAPTATTEPPAPPDSSTLTLSVAEVREITPPALESEPDFDLHKPYTDTQPDFDMSVACQKLFNQDQ KFGEGWTNFRTLTYSGPSNIGIKQSIAVYPDRNAAQSVFGGIQDNLSACQKSYPVARYGAPYTLSKLAGDDKTVMAQYAD TVNGPGSVELYRLDEQVIIDVSAAHFSTDPHVAETVLQRIREKLRSRA
Sequences:
>Translated_208_residues MLLAGLLMVLVGCTQAPTATTEPPAPPDSSTLTLSVAEVREITPPALESEPDFDLHKPYTDTQPDFDMSVACQKLFNQDQ KFGEGWTNFRTLTYSGPSNIGIKQSIAVYPDRNAAQSVFGGIQDNLSACQKSYPVARYGAPYTLSKLAGDDKTVMAQYAD TVNGPGSVELYRLDEQVIIDVSAAHFSTDPHVAETVLQRIREKLRSRA >Mature_208_residues MLLAGLLMVLVGCTQAPTATTEPPAPPDSSTLTLSVAEVREITPPALESEPDFDLHKPYTDTQPDFDMSVACQKLFNQDQ KFGEGWTNFRTLTYSGPSNIGIKQSIAVYPDRNAAQSVFGGIQDNLSACQKSYPVARYGAPYTLSKLAGDDKTVMAQYAD TVNGPGSVELYRLDEQVIIDVSAAHFSTDPHVAETVLQRIREKLRSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22658; Mature: 22658
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAGLLMVLVGCTQAPTATTEPPAPPDSSTLTLSVAEVREITPPALESEPDFDLHKPYT CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCC DTQPDFDMSVACQKLFNQDQKFGEGWTNFRTLTYSGPSNIGIKQSIAVYPDRNAAQSVFG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHC GIQDNLSACQKSYPVARYGAPYTLSKLAGDDKTVMAQYADTVNGPGSVELYRLDEQVIID CHHHHHHHHHHCCCCHHCCCCEEHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEEE VSAAHFSTDPHVAETVLQRIREKLRSRA EEHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLAGLLMVLVGCTQAPTATTEPPAPPDSSTLTLSVAEVREITPPALESEPDFDLHKPYT CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCC DTQPDFDMSVACQKLFNQDQKFGEGWTNFRTLTYSGPSNIGIKQSIAVYPDRNAAQSVFG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHC GIQDNLSACQKSYPVARYGAPYTLSKLAGDDKTVMAQYADTVNGPGSVELYRLDEQVIID CHHHHHHHHHHCCCCHHCCCCEEHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEEE VSAAHFSTDPHVAETVLQRIREKLRSRA EEHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA