Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628898
Identifier: 169628898
GI number: 169628898
Start: 1812386
End: 1813582
Strand: Direct
Name: 169628898
Synonym: MAB_1809
Alternate gene names: NA
Gene position: 1812386-1813582 (Clockwise)
Preceding gene: 169628897
Following gene: 169628899
Centisome position: 35.77
GC content: 60.48
Gene sequence:
>1197_bases TTGAGTATCCGTGACAGCCTCAATAGTCGCCGCCCCGTGCCGGAAGAGTCGGCACCAGAGCAGGCGAAAATGCGCGCGGA GTGGGACGGCACCGCAGGTTTTATTCAGACGGGCAAGGTCTCAGATGACTTCGATGAGCAGGACTTCGAGGGCATCCTTC GCGAGTTCGCCGACGAACTGCACTACGACCCAGCCAAGGTTGAGATTGCCGGTAACCCACAGGTCGTGGTGTGGGAGACG GGCTTCCGCAACAAGGAGGGGGAGTGGGAGAAGCATAAGCACCACTCCTGGCGGTATCACCTCGCCGTCCGGCGTTGGGC TATAGACCTACCCGCCTTGTATGCGGAGGTCCGCAAGACGAGGCCGGTGCAGCCGAAGAAACCCACAGGGGAGTCGACGG TTGTGGTGTGCTGGGCAGACATTCAAACCGGGAAGGTCGACCACCTCGGCGGCGTCAAAGAGTTATTACTGCGCCTTCAG GAAAAGCGGGAAAACCTGAACGCCTACCTGAAACGTTCAAGGTTTGATCGCATCATCATCGCGGACGTGGGCGACATTGT GGAGGGCTTCGACAACGTCACAGCCCAAACCCGCACCAACGGCCTATCTCTCATGGATCAGGTCGAGGTTGCCGCCACGG AGTTCTGGAAGACCATCACCCTGTGCGCCAAGCACGCCCCGGTGGATGTGCTGTCCATCCCGTCCAATCACGGCCAGTGG CGCCGCGGGAAGGATCTAATCGGGAAGCCCACCGACGACTGGGGATTGGCTATCTCGAAACGTCTTGAATGGCACAACAA CCCCGACAACCAAGGCCCGAACCTGCCGGTAGATTTCCACCGGCCGCCCGAGTGGTGCGAGACACTGCAGTTCGATGTAC GCGGCACCAGGTTGGGGTTGGCGCATGGCCACCAAGCCTCCGGCGCTGACCGGGTTAAGACGTGGTGGGAGAAGATGACC CACGGCGGCGTCATGGACTGCCACGTCCTCTTGACTGGACATTTCCACTACGCCAGCCTGCGCCCCCATGGGCGGGATCA AGTAACGGGTAAGGCGCGCTGGCACATCCAAGCCTCAACCCTGGACAACGGCTCCGCATGGGTGATGAACAAGATGGGCG AAGACGGAGATCCGGCACTGACGGTGTTCCAGATCAACAACGACGGCTTCGACGTACAGAGCTTCGCCCTCCTATGA
Upstream 100 bases:
>100_bases AAGGGAAGTCGATTGAGGCGCTTGTCCGCGTGCTGCGGAATGAGGGTCTTCCGGTGGGGCCGGTGCAGTTCCGGCGTCAC GTGCGAGAGTGTGTGCGCTC
Downstream 100 bases:
>100_bases AACGTCACGATACGATTCAAGTAGGCGCCAACGCTGAAAAGCGCTGCCCGAGATGCGAAACCGTCAAGCCCGTCACGGCA TTCTCGGTTGACCGTAACCG
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSIRDSLNSRRPVPEESAPEQAKMRAEWDGTAGFIQTGKVSDDFDEQDFEGILREFADELHYDPAKVEIAGNPQVVVWET GFRNKEGEWEKHKHHSWRYHLAVRRWAIDLPALYAEVRKTRPVQPKKPTGESTVVVCWADIQTGKVDHLGGVKELLLRLQ EKRENLNAYLKRSRFDRIIIADVGDIVEGFDNVTAQTRTNGLSLMDQVEVAATEFWKTITLCAKHAPVDVLSIPSNHGQW RRGKDLIGKPTDDWGLAISKRLEWHNNPDNQGPNLPVDFHRPPEWCETLQFDVRGTRLGLAHGHQASGADRVKTWWEKMT HGGVMDCHVLLTGHFHYASLRPHGRDQVTGKARWHIQASTLDNGSAWVMNKMGEDGDPALTVFQINNDGFDVQSFALL
Sequences:
>Translated_398_residues MSIRDSLNSRRPVPEESAPEQAKMRAEWDGTAGFIQTGKVSDDFDEQDFEGILREFADELHYDPAKVEIAGNPQVVVWET GFRNKEGEWEKHKHHSWRYHLAVRRWAIDLPALYAEVRKTRPVQPKKPTGESTVVVCWADIQTGKVDHLGGVKELLLRLQ EKRENLNAYLKRSRFDRIIIADVGDIVEGFDNVTAQTRTNGLSLMDQVEVAATEFWKTITLCAKHAPVDVLSIPSNHGQW RRGKDLIGKPTDDWGLAISKRLEWHNNPDNQGPNLPVDFHRPPEWCETLQFDVRGTRLGLAHGHQASGADRVKTWWEKMT HGGVMDCHVLLTGHFHYASLRPHGRDQVTGKARWHIQASTLDNGSAWVMNKMGEDGDPALTVFQINNDGFDVQSFALL >Mature_397_residues SIRDSLNSRRPVPEESAPEQAKMRAEWDGTAGFIQTGKVSDDFDEQDFEGILREFADELHYDPAKVEIAGNPQVVVWETG FRNKEGEWEKHKHHSWRYHLAVRRWAIDLPALYAEVRKTRPVQPKKPTGESTVVVCWADIQTGKVDHLGGVKELLLRLQE KRENLNAYLKRSRFDRIIIADVGDIVEGFDNVTAQTRTNGLSLMDQVEVAATEFWKTITLCAKHAPVDVLSIPSNHGQWR RGKDLIGKPTDDWGLAISKRLEWHNNPDNQGPNLPVDFHRPPEWCETLQFDVRGTRLGLAHGHQASGADRVKTWWEKMTH GGVMDCHVLLTGHFHYASLRPHGRDQVTGKARWHIQASTLDNGSAWVMNKMGEDGDPALTVFQINNDGFDVQSFALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45182; Mature: 45051
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRDSLNSRRPVPEESAPEQAKMRAEWDGTAGFIQTGKVSDDFDEQDFEGILREFADEL CCCHHHHHCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH HYDPAKVEIAGNPQVVVWETGFRNKEGEWEKHKHHSWRYHLAVRRWAIDLPALYAEVRKT CCCCCEEEECCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHC RPVQPKKPTGESTVVVCWADIQTGKVDHLGGVKELLLRLQEKRENLNAYLKRSRFDRIII CCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ADVGDIVEGFDNVTAQTRTNGLSLMDQVEVAATEFWKTITLCAKHAPVDVLSIPSNHGQW ECHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC RRGKDLIGKPTDDWGLAISKRLEWHNNPDNQGPNLPVDFHRPPEWCETLQFDVRGTRLGL CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCEEEEE AHGHQASGADRVKTWWEKMTHGGVMDCHVLLTGHFHYASLRPHGRDQVTGKARWHIQAST CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECEEEEECCCCCCCCCCCCEEEEEEEEE LDNGSAWVMNKMGEDGDPALTVFQINNDGFDVQSFALL CCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHEECC >Mature Secondary Structure SIRDSLNSRRPVPEESAPEQAKMRAEWDGTAGFIQTGKVSDDFDEQDFEGILREFADEL CCHHHHHCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH HYDPAKVEIAGNPQVVVWETGFRNKEGEWEKHKHHSWRYHLAVRRWAIDLPALYAEVRKT CCCCCEEEECCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHC RPVQPKKPTGESTVVVCWADIQTGKVDHLGGVKELLLRLQEKRENLNAYLKRSRFDRIII CCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ADVGDIVEGFDNVTAQTRTNGLSLMDQVEVAATEFWKTITLCAKHAPVDVLSIPSNHGQW ECHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC RRGKDLIGKPTDDWGLAISKRLEWHNNPDNQGPNLPVDFHRPPEWCETLQFDVRGTRLGL CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCEEEEE AHGHQASGADRVKTWWEKMTHGGVMDCHVLLTGHFHYASLRPHGRDQVTGKARWHIQAST CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECEEEEECCCCCCCCCCCCEEEEEEEEE LDNGSAWVMNKMGEDGDPALTVFQINNDGFDVQSFALL CCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA