Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628882
Identifier: 169628882
GI number: 169628882
Start: 1792801
End: 1793388
Strand: Direct
Name: 169628882
Synonym: MAB_1793
Alternate gene names: NA
Gene position: 1792801-1793388 (Clockwise)
Preceding gene: 169628881
Following gene: 169628883
Centisome position: 35.38
GC content: 60.03
Gene sequence:
>588_bases ATGGCTGAAGAAGTCGGCAACGTTTTCGCCGCAGAGCCGTCCGCCGCTGGGGCCGCGTTCGTCGCCCCGCTCGGAACTAC CCTCCCAACCAGTGTCGACGGAGTGCTCGATGCCGCGTTCGTCGGTCTTGGGTATGTCGGCGAGGACGGTATCACTGAAA CATCGGAGCGGTCCACCGATGAGAAGAAAGACATGGGTGGCCGCATCGTCAAGGTGCTGCAGACCGAGTACAACCACTCG TTCAAATTCGTCCTCCTGGAATCGCTGAATGCCGATGTCCTCAAGGCGATCTACGGTGCTTCAAACGTCACCGTCACCCC CGCTGACGGTACTCACGGCACCCAGGTGAAGGTCCGCAAGACCAGCAAGAAGCTGCCCCACCAGACGTGGGTGTTCGACA CCATCGACTCGGAGCTGTCCGCGAAGTACCGCAACTGCGTCGCAGACGGGCAGGTCATCTCTGTTGGTGATGTGACCTTG GCTAGCAAGGACACCATCGAATACGAGGTGGAACTGAAGGTCTTCGAGTCGTCCACCGGTGAATACGTGACCACGTACAC CGACGACGGGCGGATCGCGGGCTCCTAA
Upstream 100 bases:
>100_bases GACCGTCGATGTATTAATGCGTTCAAATCCCTGAATTTACAACTAAATACACCCTTTCAAAGGCTCGGCTGCACCGATCT GCTTCTGAAAGGGGCACATC
Downstream 100 bases:
>100_bases TAGACGCGGCGGGGCCGAATTCCCCTGCAGCCGAGCGCGGCCCCGCCGCTCTCCAAGCGCTACGGCTGCACACAAACCCC TTGAAAGGGCGCTCATGGCT
Product: Phage associated (putative structural protein)
Products: NA
Alternate protein names: Phage Tail Protein; Phage Protein; Prophage LambdaSa1 Protein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAEEVGNVFAAEPSAAGAAFVAPLGTTLPTSVDGVLDAAFVGLGYVGEDGITETSERSTDEKKDMGGRIVKVLQTEYNHS FKFVLLESLNADVLKAIYGASNVTVTPADGTHGTQVKVRKTSKKLPHQTWVFDTIDSELSAKYRNCVADGQVISVGDVTL ASKDTIEYEVELKVFESSTGEYVTTYTDDGRIAGS
Sequences:
>Translated_195_residues MAEEVGNVFAAEPSAAGAAFVAPLGTTLPTSVDGVLDAAFVGLGYVGEDGITETSERSTDEKKDMGGRIVKVLQTEYNHS FKFVLLESLNADVLKAIYGASNVTVTPADGTHGTQVKVRKTSKKLPHQTWVFDTIDSELSAKYRNCVADGQVISVGDVTL ASKDTIEYEVELKVFESSTGEYVTTYTDDGRIAGS >Mature_194_residues AEEVGNVFAAEPSAAGAAFVAPLGTTLPTSVDGVLDAAFVGLGYVGEDGITETSERSTDEKKDMGGRIVKVLQTEYNHSF KFVLLESLNADVLKAIYGASNVTVTPADGTHGTQVKVRKTSKKLPHQTWVFDTIDSELSAKYRNCVADGQVISVGDVTLA SKDTIEYEVELKVFESSTGEYVTTYTDDGRIAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20767; Mature: 20636
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEVGNVFAAEPSAAGAAFVAPLGTTLPTSVDGVLDAAFVGLGYVGEDGITETSERSTD CCCCCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EKKDMGGRIVKVLQTEYNHSFKFVLLESLNADVLKAIYGASNVTVTPADGTHGTQVKVRK HHHHCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEC TSKKLPHQTWVFDTIDSELSAKYRNCVADGQVISVGDVTLASKDTIEYEVELKVFESSTG CHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCEEECCCCCEEEEEEEEEEECCCC EYVTTYTDDGRIAGS CEEEEEECCCEEECC >Mature Secondary Structure AEEVGNVFAAEPSAAGAAFVAPLGTTLPTSVDGVLDAAFVGLGYVGEDGITETSERSTD CCCCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EKKDMGGRIVKVLQTEYNHSFKFVLLESLNADVLKAIYGASNVTVTPADGTHGTQVKVRK HHHHCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEC TSKKLPHQTWVFDTIDSELSAKYRNCVADGQVISVGDVTLASKDTIEYEVELKVFESSTG CHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCEEECCCCCEEEEEEEEEEECCCC EYVTTYTDDGRIAGS CEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA