Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628832
Identifier: 169628832
GI number: 169628832
Start: 1764589
End: 1765791
Strand: Direct
Name: 169628832
Synonym: MAB_1742
Alternate gene names: NA
Gene position: 1764589-1765791 (Clockwise)
Preceding gene: 169628831
Following gene: 169628833
Centisome position: 34.82
GC content: 60.93
Gene sequence:
>1203_bases GTGAAGCTGGAACCGACCGAAGCGCAGCGGAAAGCCATGAGGCACATAGCGGGGATTCGGCTCGATGCAGCCGCGCACCA CCGCTTTAAGCCTGATCCTGAAGAGTTCCTTACTGAGCTAATCGCTGCCGCTAACAGCATCCCTGAGGGGCCACCTGTTG GCACCATCGCACGACGACCAGACGGGGAGTGGATTGCATGGCGCACCGAAGACGGTTGGGGGTACCGGTTCATCGGGGAT GAGGAACCGAACGAATGGCCTCCCGGTAGTAGCATCGCCGACTTTTGGCCGCAGATCCGCCCCGACGAGTGGCCCGAACA AGTAGGGTTGGATTGGTTCCCACCTGGCGAAGAGCCGATTGTGCCTCGGCCCGACCCAACAGCACAACAGGAACCGGGGG CGTTCAACCGCTTTCCGGGAATTGAGAATCCCACCACCTCCGACTACATCGGGGCGGCTGTTGCCGATGAGCAGCTGAAG TTGGTGTTCGCTCTCCGCGATGTGCGTAAAGAGCGGGGTCTGGAAATAGCGGAAGTGGCAGAGGCCGCAGACGTGCCCGC CTCTGAGATCTCCATGTTTGAGAGCGGTTCGAGTAATCCGACTTTGTCGTTGGTTCGCCGTTACGCCAAGGCGGTGGGGG CGGTTTTCACGGTTGATGTGCGTAAGTGGGAAGACACTCAGCCACAACGGGAACCGGCGCTACGCGAACGGTTTCCCGAG CAGGCATCGGCTTACGTGGCCGACCCCGAGTTAGCCGAGGTTGACGATGAACCACTCCCATCCGGGTCACTGATCACCCC CAAGCCCCGTACACCCCGTGTCGTTGACCGTCTAGGGGTAGACGAGCAGGGATCACGGTGGCGGGATGAGAACGGATTAA TCCACTCGTTCACGGAGGGTGCAGACGGTGGGCGATGGAAGACGCAGATTGGTGGGTCCTGGTACCCGTGGGCGAAGGGT GTAGTGCCGCATGGCGGCGAGTACACCGAAATCCTTGAGCCCCGTGTACTAGCCAGCCTGGCCTATAACGAGGCGCGCGA GGGCGCGGTGTGGAGCATCGTCACCAAAGCGGGGGTTAGGCGCCTGTTTCAGTGTCAATCCGACAGGTGGCACACGCGAC TCGACCTTCCTGGTACGCACTGGACACTATGCGAGAACTTCGGTGACGGCCCCTACACCGAAGTTCTCGGTGATCCCTCA TGA
Upstream 100 bases:
>100_bases ACGCTATCGAGGAAGAGCTTTCGTTGGGTGGTGATGCGGGGACTGTGATGGCCCGTATCGGTGAGGTGTTGTCAGAAGAG GGCTACAGGGTGGTGGCGTT
Downstream 100 bases:
>100_bases CTCGTGGTGTCCGTATGTCCGATTGGCTCGCAACCGATTACCGGCGTCTGTCTGATCCTGGTCCTGCTGTTCCTGACTGG TTTTGGGTTGATGACGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKLEPTEAQRKAMRHIAGIRLDAAAHHRFKPDPEEFLTELIAAANSIPEGPPVGTIARRPDGEWIAWRTEDGWGYRFIGD EEPNEWPPGSSIADFWPQIRPDEWPEQVGLDWFPPGEEPIVPRPDPTAQQEPGAFNRFPGIENPTTSDYIGAAVADEQLK LVFALRDVRKERGLEIAEVAEAADVPASEISMFESGSSNPTLSLVRRYAKAVGAVFTVDVRKWEDTQPQREPALRERFPE QASAYVADPELAEVDDEPLPSGSLITPKPRTPRVVDRLGVDEQGSRWRDENGLIHSFTEGADGGRWKTQIGGSWYPWAKG VVPHGGEYTEILEPRVLASLAYNEAREGAVWSIVTKAGVRRLFQCQSDRWHTRLDLPGTHWTLCENFGDGPYTEVLGDPS
Sequences:
>Translated_400_residues MKLEPTEAQRKAMRHIAGIRLDAAAHHRFKPDPEEFLTELIAAANSIPEGPPVGTIARRPDGEWIAWRTEDGWGYRFIGD EEPNEWPPGSSIADFWPQIRPDEWPEQVGLDWFPPGEEPIVPRPDPTAQQEPGAFNRFPGIENPTTSDYIGAAVADEQLK LVFALRDVRKERGLEIAEVAEAADVPASEISMFESGSSNPTLSLVRRYAKAVGAVFTVDVRKWEDTQPQREPALRERFPE QASAYVADPELAEVDDEPLPSGSLITPKPRTPRVVDRLGVDEQGSRWRDENGLIHSFTEGADGGRWKTQIGGSWYPWAKG VVPHGGEYTEILEPRVLASLAYNEAREGAVWSIVTKAGVRRLFQCQSDRWHTRLDLPGTHWTLCENFGDGPYTEVLGDPS >Mature_400_residues MKLEPTEAQRKAMRHIAGIRLDAAAHHRFKPDPEEFLTELIAAANSIPEGPPVGTIARRPDGEWIAWRTEDGWGYRFIGD EEPNEWPPGSSIADFWPQIRPDEWPEQVGLDWFPPGEEPIVPRPDPTAQQEPGAFNRFPGIENPTTSDYIGAAVADEQLK LVFALRDVRKERGLEIAEVAEAADVPASEISMFESGSSNPTLSLVRRYAKAVGAVFTVDVRKWEDTQPQREPALRERFPE QASAYVADPELAEVDDEPLPSGSLITPKPRTPRVVDRLGVDEQGSRWRDENGLIHSFTEGADGGRWKTQIGGSWYPWAKG VVPHGGEYTEILEPRVLASLAYNEAREGAVWSIVTKAGVRRLFQCQSDRWHTRLDLPGTHWTLCENFGDGPYTEVLGDPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44659; Mature: 44659
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEPTEAQRKAMRHIAGIRLDAAAHHRFKPDPEEFLTELIAAANSIPEGPPVGTIARRP CCCCCHHHHHHHHHHHHCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC DGEWIAWRTEDGWGYRFIGDEEPNEWPPGSSIADFWPQIRPDEWPEQVGLDWFPPGEEPI CCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCC VPRPDPTAQQEPGAFNRFPGIENPTTSDYIGAAVADEQLKLVFALRDVRKERGLEIAEVA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAADVPASEISMFESGSSNPTLSLVRRYAKAVGAVFTVDVRKWEDTQPQREPALRERFPE HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCH QASAYVADPELAEVDDEPLPSGSLITPKPRTPRVVDRLGVDEQGSRWRDENGLIHSFTEG HHHCEECCCCHHHCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCC ADGGRWKTQIGGSWYPWAKGVVPHGGEYTEILEPRVLASLAYNEAREGAVWSIVTKAGVR CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLFQCQSDRWHTRLDLPGTHWTLCENFGDGPYTEVLGDPS HHHHHCCCCCEEEECCCCCCCHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure MKLEPTEAQRKAMRHIAGIRLDAAAHHRFKPDPEEFLTELIAAANSIPEGPPVGTIARRP CCCCCHHHHHHHHHHHHCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC DGEWIAWRTEDGWGYRFIGDEEPNEWPPGSSIADFWPQIRPDEWPEQVGLDWFPPGEEPI CCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCC VPRPDPTAQQEPGAFNRFPGIENPTTSDYIGAAVADEQLKLVFALRDVRKERGLEIAEVA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAADVPASEISMFESGSSNPTLSLVRRYAKAVGAVFTVDVRKWEDTQPQREPALRERFPE HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCH QASAYVADPELAEVDDEPLPSGSLITPKPRTPRVVDRLGVDEQGSRWRDENGLIHSFTEG HHHCEECCCCHHHCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCC ADGGRWKTQIGGSWYPWAKGVVPHGGEYTEILEPRVLASLAYNEAREGAVWSIVTKAGVR CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLFQCQSDRWHTRLDLPGTHWTLCENFGDGPYTEVLGDPS HHHHHCCCCCEEEECCCCCCCHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA